GrainGenes Sequence Report: Ta.23079.1.S1_a_at
Sequence
CD453464
Contig
Ta.23079.1.S1_a_at Ta.23079.1.S1_x_at NSFT03P2_Contig18316
External Databases
Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index
TC282000
wEST map position
CD453464
NCBI UniGene
Ta.23079
DB Remark
Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, strongly similar to NP_001049769.1 Os03g0285700 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Chinese Spring
Chromosome
4AS 4BL 4DL
Clone Library
CS wheat heat-stressed seedling cDNA library
Tissue
Leaf
Developmental Stage
Two-week old seedling
Data Source
genbank Release 136, Jun 15 2003 genbank Updated Nov 2006
Title
WHE0754_B10_D20ZT CS wheat heat-stressed seedling cDNA library Triticum aestivum cDNA clone WHE0754_B10_D20, mRNA sequence.
Strain
lab_host E. coli SOLR
Clone
WHE0754_B10_D20
Probe
WHE0754_B10_D20
Remark
DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: T7 primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Two-week old seedling were heat treated at 37 C for 2 hr and cyclic heat treated at 37 C for 2 hr for two days at Texas Tech University (D. Zhang, H. Nguyen lab). The tissue, total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA
tttttttttttttttttttttaaaggcgatcgagtgcaacggcacacaaa
ccactgacagagtacaaggtatggcctcaagccaacggacattattacag
agatgattacttagcagtctgcaggttcacactgacccctagtctaacgc
agaacaagatcaccctgatcgcatagtagcagcagtagtagacacgcctc
ttacgcttcggcgtaccccagttccgagagcctgaggtgtgcctccttgt
agtcctcgaagaaagccttctcatccgcagcatatttctccacaagaggg
cgaaagacagggtcagtcagcagggttttgtcacttggaagctgaagaag
cccctctttgtcaccactcagaagctccgtgaagtaagagttgtcaaact
tcaaagggttccttgtccagggtccctcaaagccagacctctccttgtgg
caccttcccagggtgtggccaccagagagggcaacaatatcctgatcact
caagcccatctgcttgccgaagacttgccttaggtggtcagaacccttgg
tagcatcagggaggcgaccctcaggtgggggctgaggcttgtcctccctc
cctgggtggaaggggatcacgggcccaccagacacctccacggcgacaac
tcccgcaagctggt

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: Ta.23079.1.S1_a_at
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