Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: CD453980

[Submit comment/correction]

Sequence	CD453980
Contig	NSFT03P2_Contig17082
External Databases	Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index	TC281322
wEST map position	CD453980
NCBI UniGene	Ta.48418
DB Remark	Locus Source: Triticum aestivum (bread wheat) UniGene title 'Clone wlmk1.pk0035.e4:fis, full insert mRNA sequence'
Keyword	EST
Species	Triticum aestivum
Cultivar	Chinese Spring
Chromosome	2AL 4BS
Clone Library	CS wheat 5-15 DAP spike cDNA library
Tissue	Spike
Developmental Stage	Adult plant
Data Source	genbank Release 136, Jun 15 2003 genbank Updated Nov 2006
Title	WHE0941_C05_E09ZT CS wheat 5-15 DAP spike cDNA library Triticum aestivum cDNA clone WHE0941_C05_E09, mRNA sequence.
Strain	lab_host E. coli SOLR
Clone	WHE0941_C05_E09
Probe	WHE0941_C05_E09
Remark	DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: T7 primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown in the greenhouse. Spikes at 5, 10 and 15 DAP were harvested, total RNA and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA	ttttttttttttttttttttaaacagcacaattccattatgtagaagctg gtacgaccccccacagcacaaacactggtcatgagaggttagactccata tgctgtaccattacatagatacaaatccagctccgactttattctttcgc tttacagattacatttgatcattcggttgcacttattccgatcttactcg tacccaccagaatacaaggtgggggtcatactttgctgttcatcatagct ggaggcagaagaagaattacagccgagatttcgctaccgcagcaggtttg aagctcgcgatcccggtgatttctcttccggtcacaaggctgttgatgtc gtaggtgccctcatatgagtaaatcggttccagatcgcagaacgcctttg ctactagaaaatcagccaaaattccattgccgcccaatagctctcggccc agagaaactacctcccttgacttgctggacgtccatgccttgcccaaact agcatggcctggtgtcattttgcctgactcagagagcttgcacaagcgcc agccgacaaggagcatggcctggatgttaccaagcatccgaacaagcttt tcttggttgagctgaaaggctgccaagggagctccaaactgcttcctttc tttcaaatacc

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.