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GrainGenes Sequence Report: CD454314

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Sequence	CD454314
Contig	Ta.3164.2.S1_at Ta.3164.2.S1_s_at Ta.3164.3.S1_a_at NSFT03P2_Contig17646
External Databases	Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index	TC291071
wEST map position	CD454314
NCBI UniGene	Ta.36674
DB Remark	Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, moderately similar to NP_001057554.1 Os06g0335500 [Oryza sativa (japonica cultivar-group)]'
Keyword	EST
Species	Triticum aestivum
Cultivar	Chinese Spring
Chromosome	7BL 7DL
Clone Library	CS wheat pre-anthesis spike cDNA library
Tissue	Spike before anthesis
Developmental Stage	Adult plant
Data Source	genbank Release 136, Jun 15 2003 genbank Updated Nov 2006
Title	WHE1790_E03_J06ZT CS wheat pre-anthesis spike cDNA library Triticum aestivum cDNA clone WHE1790_E03_J06, mRNA sequence.
Strain	lab_host E. coli SOLR
Clone	WHE1790_E03_J06
Probe	WHE1790_E03_J06
Remark	DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: T7 primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown in the greenhouse. Whole spike with awns trimmed, white, green and yellow anther were collected and total RNA, and poly(A ) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors). Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown in the greenhouse. Whole spike with awns trimmed, white, green and yellow anther were collected and total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA	ttttttttttttttttttttttggctcgccaaacacagatgaaagaaaag agttgcggtacagacagagcacaccaatttacaacggaaaccgcatacaa cacacgcgaatcaaatcaaagtagtgcagtagtagtagatacacacacat cagcttacacaatctaacatgcttgttccgaacgaacatacaaggaaata acaaagagaatacacgtaggttatatatataagtaaatccctttctcatc acacataaagtccatcacccttgtaagatgcgatcgcaggaaaggaaaca gatcgggttcatcgttcttgctacttctggttcttactcttctcggcggc cctcggagcgaggcccactgcatctgaccccttcatgatcctcatcctcc tacagctgtctgtgaacattcgccatggaacatcaccaacaagcatccaa tcaccatccttatcctcataagtgagcacaagttcagtgccgcttttaag gtccatcagccggcaatcagataatccatctcttcccgattttccagtcg attcaccatgaccaacagtaaagccgctgaactttttctccagctccagc gagaggtccttatagttcttatacatcttgagat

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