GrainGenes Sequence Report: CF133507
Sequence
CF133507
Contig
Ta.26137.1.S1_at
External Databases
Data at GenBank Data at EMBL Data at DDBJ
NCBI UniGene
Ta.26137
DB Remark
Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, moderately similar to NP_001060796.1 Os08g0107300 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Chinese Spring
Clone Library
Wheat meiotic floret cDNA library
Tissue
Whole florets with anthers
Developmental Stage
Meiotic stages pre-meiosis-metaphase I
Data Source
genbank Release 137, Aug 15 2003 genbank Updated Nov 2006
Title
WHE4358_G04_N08ZT Wheat meiotic floret cDNA library Triticum aestivum cDNA clone WHE4358_G04_N08, mRNA sequence.
Strain
lab_host E. coli DH10B
Clone
WHE4358_G04_N08
Remark
DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: T7 primer. Note: Vector: pSPORT1; Site_1: SalI; Site_2: NotI; Plants were grown in a glasshouse. Anther meiotic stage was determined microscopically after removing a single anther from a primary floret. If determined to be between (and including) meiotic stages pre-meiosis and metaphase I, remaining floret tissue was collected and pooled for library construction. The tissue, total RNA, and poly(A) RNA were prepared, cDNA synthesised, and directionally ligated into pSPORT1 by Tim Sutton in the P Langridge Lab at the Department of Plant Science, University of Adelaide, Waite Campus, Australia. Average insert size 1.4Kb. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA
cgggtcgacccacgcgtccgggatctgactatactagctcccctgaatgc
tccaaacactgatggcattgatccaggtttgtgcacttaaggccctgttc
ggaacttccccgctccgtggagttggggagttgggttttggcagctccac
ctaattaagctaaaagatggtccgctccgggagcggagttaacggagcag
agacaaaccgaacacagcctaaattgacagactattctctcccaaaacct
tagttaagtataaaatttcaatttatagggagttacgtttgtacttcata
tgtgacaccttgtgatgatgatctttgctgtactaaatacgaaccggctt
tgcaaagagcaaatttatccctgacagtttctcttcatgaacaataacag
actcaagttcagaagtttgtgtcgaggactgctatatcgaaagtggagat
gacctggttgctgtcaagagtggttgggatcagtatgggatatctgtagg
caaacccagctcaaacattatcatccagcgggtttcaggcaccacaccta
cgtgctccggtgtgggtttcggaagcgagatgtcgggtgggatatcaaac
gtgcttgtccgcgacctccacatatggaactctgcttccgcagtgaggct
aaagaccgatgtggggcgcggcgggtacataaccaacatcaccatcgcca
atgtgacgatggag

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: CF133507
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