GrainGenes Sequence Report: AM884190
Sequence
AM884190
Subsequence
AM884190_1.cds 1 2568
External Databases
Data at GenBank Data at EMBL Data at DDBJ
DB Remark
Locus Source: Triticum turgidum subsp. durum (durum wheat)
Keyword
pgip3 gene retrotransposon
Species
Triticum turgidum subsp. durum
Cultivar
Langdon#65
Chromosome
7AS
Clone Library
BACLDN65893O10
Data Source
genbank Downloaded 2008-2009
Title
Triticum turgidum subsp. durum interrupted pgip3 gene and partial retrotransposon Ikeros.
Strain
durum
Gene
pgip3
Remark
DB_xref: taxon:4567 Feature: gene: pseudo Feature: gap: estimated_length = unknown Feature: repeat_region: mobile_element = 'retrotransposon:Ikeros' Feature: source: mol_type = 'genomic DNA';
EMBL Feature
repeat_region 458 1227 Location: 458..>1227 repeat_region 1328 2018 Location: <1328..2018 feature_gene 1 457 Location: join(1..457,2019..2568) unsure 1228 1327 Location: 1228..1327 gap 1228 1327 Location: 1228..1327
DNA
atgagcactccaccctcggcacatgccttccccggcctcctcctcctcct
cctcctcggcggagcggtcatcgtctccgccgagaataacaaagactgcc
acccaagcgataaggctgcgcttctcgttgtcaagtctgccttcggcaac
cagagccacttcgcctcgtggactccttccaccccgtgctgcgaacggca
cgacgccacttgcaacgacgccggtcgcgtcatctccctcctcttcttcg
tggatttcacccttacgggcaccatcccggacgccatgtccgcctcatcg
agcttctcgtcctcaacctctattacctcccggccatctccggccatatc
cccaagggaatcgccaagctatccaaactcacctcgctcagcatctctct
cacctccgtttcgggccccgttccgtccttcctgggcgcactgaccaagc
tcgaagtgatagatcctatggatcgtggtaggctagatatttccggtaac
ctaccttccttgggtgcggatgagctcgatccagagccggccatggtgat
gtaggggccggtgatcgcagagggatcgagatggagaggtggtagtggtg
cttcccgtgagcactgcgattgccctagatcgaaaggggatatcagtggg
gagtctggcggcgcggtgaacctcgtaccgtgcgccccagcccccacctc
tttatatatcgcaggtcacaggggcccaccaaccatagaacggttgggcg
cccccgatcagagcgtgaatagattaggacccgatgggccgctgagccca
ctcggtggagagatcaacctaacattctcccccttgatctcaacttttac
ttttaaccttatactttctagtttatttgtttcatcacatattggtacat
agagcatgtttcatcatcacagcttaattgccgttagaatcatacagctg
caacatacgttatgatcagaagcaaattctagttccttttgggcctatcc
aggaattataaggctttcccttaaacccatgacggctatgtattccttga
acacattgggtggtaagcctttcgttagcggatccacaagcatatccttt
gttcttatatgctcgagacttatagtttgatcctggatcttatctttcac
aacataataccttatctctattgttttggcagcattactcgacttgttgt
tgtgagcgtaaaataccgcgggttggtnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnctgcgcccctaccaaccccttcg
tcggtcatgcgttccccttgtggtgagcgcgccgctgtcgaatggatcgg
tggtggtgatctttgcccctgaaaaggggtggtgttcttcttnntcgatg
cctcggcttgccgatgcgcatcgagatcgataggaacggcgcggccttgt
ggcgacagctactttttctgtttccttgaaggattcgttctttgccctgt
ctagggttcttgggggaggggatctctatttttttctcttgttttatctt
ttttaccgaaaaacatctaaccaagatggcatgataccattgatagatcc
tatggatcgtggtaggctaaatctttccggtaacctaccttccttgggtg
cggatgagctcgatccagagccgtccatggtgatgtaggggccggtgatc
gcagagggatcgagatggagaggtggcagtggtgcttcccgtgagtactg
cgattaccctagatcgaaaagggatatctgtgggaagtctggcggtgcgg
tgaacctcgtaccgtgcgtcccggcccccacctctttatatattgcaggt
cacaggggcccactaaccgatagaacggttgggcgcccccgatcaaggcg
tgaatagatcagggcccgatgggccgttgagtccactcggtggagagatc
aacctaatacagagaactcaccctctcctccaacttcctctccggcacca
tcccggcggcgctcgggggcctccgttacttagactccatcgacctcaga
aacaacagcctcacaggcaccatcccgccactcttctccaaatccactct
tctcccagtccttttgctctccgacaaccacctctccggctccatcccag
ccgagttcgctgcagtcggcttcctgcaagtcgacctctcccacaacgct
ctcaccggcgacgcgtccgtgttcttcggcaggacaaaggagctgcaaag
cattgacctgtcccacaacgccctcagcttcgacctctccggcgtggagt
tcccggaggagatgcaagccatggatgcgagccacaacgccatccgcggc
ggcatcccagcgcaggtggcgaatgtatcgaacctgcggcagttcaacgt
gagctacaacaagctgtgcggccaggttccggccgccttggcgaggttgg
atgtctacaacttccagcacaacaagtgcctctgcggcgccccactccca
aatccatgcaagaaataa
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: AM884190
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||