Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: DQ201141

Sequence	DQ201141
Subsequence	DQ201141_1.cds 1724 5836
External Databases	Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index	TC154310
DB Remark	Locus Source: Hordeum vulgare subsp. vulgare
Species	Hordeum vulgare subsp. vulgare
Cultivar	Kompolti korai
Chromosome	4H-S
Data Source	genbank Release 150, Oct 8 2005 genbank Updated Nov 2006
Title	Hordeum vulgare subsp. vulgare cultivar Kompolti korai phytochrome A (PhyA) gene, complete cds.
Strain	vulgare
Gene	PhyA
Gene Product	phytochrome A
Remark	DB_xref: taxon:112509 [ Show all 9 ]
EMBL Feature	primer_bind 1 20 Location: 1..20 primer_bind 6638 6659 Location: complement(6638..6659) feature_gene 1 6659 HvPhyA Location: 1..6659 5_UTR 1 72 Location: join(1..72,1665..1723) 3_UTR 5837 5870 Location: join(5837..5870,6362..6659)
DNA	actccaccagcccactcctcccctccaccacggccccgccacctctccat tgccgccggcgccgggcagcaggtaccctcccctctaacctcctcccatc ttccgcctgcgtgtatgtatgcttggaacttggatgtagaggtttcttcc ctgttgactctggacgcgtgatggtgattccagaatctaatttgatcccg ggaagttagagggcgacgtccctgctctgtttccggtgatcagggctcag cgccgtactgccacacagcatgaatttgtggcgctggggagaggttgaga gagccacgttcctgctctgcagtagtagtgttgcaagtgtggggattcag aaatcagaatcccctttctagttgaccagcgaaagcagagcatctctctg ctcagctgatttgggactgagagaggtcttctggtgctggcgttcgttcc agttacagactttccgagcgccgggtggtccttgatttctctccatccat gtgccatgtcaaatgtcaccggaatgacaggaaccgccgagcggttcgtc gatcccggagggcgctttgccgaggcagagaccctcgtaatctgtttgct tggttgtttgcggtgatcgatacctcgatggtagtggcgtgctgattttt tgttgttcgattcatcatgtaggttcttcctgaatgttatcttgtggttg taggttcagttgcctttgcctttttctgaaactttttaagctttcagtct tgcactatgaaaccgggaggttttggacgcccggagcacaaaaactcaaa atctacacccctgctagaaatatagagtatgtgaaatggaaccatgaccc ggaaaacgcatattactggaagtaccaacaagtgctggtcatgccttgct agagtgttttttcttctgaattttggcatgggggtattccgtattgttga aataatacaagtacactcttcgcaaaaacaaaaaaagagagaagagaaat aatgcaagtttcttctttctaaaaggggataaccccggcctctgcatcaa gagaaataatacaagtacacgacagaaaggccagaactaaccttcccaat actatggccacattctttttctccagatgagataattgactctcctatat aagaaattattccaactgttattctactccctctgtaaacttttgtaaga cgttttaggtcactactagggagtgctttttattaagccatacattttgt ttggaaaaaggatcatcgggttaccgtaatgttgagaagagtgaacctga cccagctaaatcacagccgactgatcgctttgaaaatcttcaagtgatga ataggataggttgcaccaaagcagatacaaactagcgagctccttcccta tggttagcgtgggaagtctctttacaagctttttgggttttcaggagatg tggtactttatggatctttattcttctattctactgcctgtcaaatttgt tcacgttactgaaaccaggaaaagaaacacatctttagtagcactaagca aatatatttagccattatgatcatctctgtttttttttgcaagctgctaa tggtttaccgtgcttttatattttactgattagtgttttccgcttctcat ttattgatgtccagcaggagtgacacacagccgataccgctgctgagagc ggctcaagtaattgaggcaagagatgtcttcctcaaggcccgctaccagc tcttccagcaggaaccgccagagcacccaggaaagggtgttagcacaaac aacccttgatgctgaactcaatgctgagtttgaagaatctagtgactcct tcgactactccaagctggtcgaagcccagcgggacactccaactgtgctg caggaagggcggtcggagaaggtcatagcctacttgcagcacattcagag agggaagatgatccaatcgtttggttgcttgttggcccttgatgagaaga gcttcaatgtcatcgcgttcagtgagaacgcgccagaaatgcttacaact gtcagccatgcggtgcccagtgtcgatgatcccccaaggcttgacattgg cacaaatgtacggtctcttttcactgagcagggtgccacagctctgcaca aggcactagggtttgctgatgtttctttgctgaatcctatcctggttcag tgcaagacctcaggcaagcctttctatgccattgttcatcgagcaaccgg ttgtttggtggtagactttgagcctgtaaaccccacagaatttcctgcca ctgctgctggggccttgcagtcttacaagcttgctgccaaggcaatctcc aagatccaggcactgccaggtggaagcatggagctgctatgcaacactgt ggtcaaggaagtctttgaacttacagggtatgatagggttatggcttaca agttccatgaagataaccatggcgaggtctttgccgagatcacaaagcct ggccttgagccttatctcggcctgcactatccagccactgatatccctca agcagctaggtttctgttcatgaagaacaaagtgcggatgatttgcgatg tccgcgcaagaaccctaaaggtcatcgaagatgaggcactcccctttgat attagcttgtgtggttcatcactcagggcagcacacagctgtcaccttca gtatatggagaacatgaactcgattgcatcccttgtcatggctgttgtgg ttaatgagagtgaagaggatgacgaggccgagtccgaacaaccagcacag cagcagaagaagaagatactatggggccttgttgtttgccaccatgagag ccccagatatgtcccttttccactgcggtatgcttgtgagttcttagcac aggtgtttgctgtccatgtgaacaaggagtttgaagtacagaaacaatta cgtgaaaaaagcatattgaggatgcaaacaattctctctgacatgctgtt caaggaagcctctcccctgactatcgtatcagggacacctaatatcatgg acctaatcaaatgtgatggtgctgctcttttgtatggggacaaagtatgg cgtctgggtaatgctccaaccgagtctcagatacgtcatattgccttgtg gctgtcagaagttcacatggactccactggcctgagtactgagagcctcc atgatgctggctacccaggagcctctgctcttggtgatatggtttgtgga atagcagtggctaagatcaattccaatgatattcttttttggttcaggtc acatacagctgaagaaatcagatggggaggtgcaaagaatgatccatcgg accaggatgacagcagaaggatgcaccctaggttgtctttcaaggcattc cttgaagttgtcaagatgaagagcttggcttggtctgactatgagatgga tgctattcattcattgcaacttatacttcgaggggcgctggatgatgtcg ccaagccaaccggaaaagctagtttagatgagcagattggtgatctaaag cttgatgggattgctgaattgcaggcagtgaccagtgaaatggttcgtct aatggaaacagcaactgtaccaatcttggcagtagatggcaatggattgg tcaacgggtggaatcagaaagccgcagaattgactgggctaagagttgat gatgctataggaaggcacatacttacccttgtggaggaatcttctgtacc agttgtccaaaggatgctatatctagctttgcagggtgagcaaatttctt gttatatactgtatatttgttttctttatctatttacctccgcgcctact ttagcttcctccttagtcagcagctttgtgttacttcttttttatatgta atttgtgtgttgaacctagctaactggttattattgcgtcaactgcttac acaattttcgattgataacttagtaatatcgattgttcatgggtctctaa taaacatttcgtgatcaaacaggcaaagaagagaaagaagttcgatttga catgaagactcatggcccaaagagagatgatggccctgttatcttggttg tgaatgcttgtgccagccgggaccttcatgatgatgttgttggggtgtgc tttgtagcccaagatatgactgtccataagttggtgatggacaagtttac tcgggttaagggagactacatggcgatcgttcacaacccaaacccactca ttcctcctatatttggtgctgatgaatttggatggtgttctgagtggaat gctgcaatgaccaagttgactggatggcacagagaggaagtgctcgataa gatgcttcttggtgaagtgtttgacagtagcaatgcttcctgccttttga agaacaaagatgcatttgtaggcctttgtgttcttatcaacagcgcgtta gccggtgaagaaacagaaaaggctccatttggcttcttcgaccgaagcgg gaagtacactgagtgccttctatcagtgaacagcagggcaaatgaggatg gtctcatcactggagtattctgttttattcatattcctagtcatgagctg caacaagcactgcaggtgcagcaggcctcggagcaggcgtcactaagaag gctgaaagctttctcctacatgagacatgcaatcaacaatcctctctcag gcatgctttactctagaaaagcactaaagaacacagatttgaatgaagaa cagatgaggcagatccatgtctcagataattgtcaccaccagctaaacaa gatacttgccgacttggatcaagataacatcatggagaagtattcttctt accaaatcttctgaattgttctcttacattctcatgtttacttatggctg tccctgttttttgtcaatttgcggacctcgtacgttgatgtcattgttcg ttgtcctaatttcacctgctttcatgcctatatgcctacttatgtgatta aaatggaagagcaaacaaacatggttacatttacacaacttgttgaacta actgctgttattatatttgtactgcttccggaaaatttagccagtatata tggtttcacttactgctcatgcttacttttatatttgagaggtattatct gcataatagtacaccgttatcatcttctaaaaataacttaattgttttct gtcatttttggtcacagttctagttgcttggatttggagatggctgaatt tgtgttgcaagatgtggtggtggctgctgtaagccaagtactgatagcct gccagggaaaaggcatcagaatctcttgcaacctgccagagagatttatg aagcaactagtctatggagatggtattcgactccagcagatcctttctga cttcctatctatttcagtgaagttctctcctgttggaggttctgttgaga tttcagcccaggcgacgaagaacagcatcggagagaatcttcaccttatt gatcttgaacttaggtacatcggtcgtgcagtatgcctgttaatttctgg aaaggaagttttgaagtcttcttctgggaatcgttagtgatggttatttt tgtctctgtatgttttcaggatcaagcaccggggattaggagtcccagca gagctgatggcgcaaatgtttgaggaggagaacacggagcagtcagagga gggcttgggcctcctagtttctagaaacctgttgaggctcatgaacggcg atgttcgtcacctaagggaagccggtatgtcaatcttcatcctcaccgcc gaacttgcttgtgctccaacggcaatgaggcagtgatgaagaagcaagtg caacacatggtcatcagatggtatgtgaaacaactctaacgtagtacact agcacagtgtgttttgttttgtcacaactgctggcttatctttccttgct ttcttgattcatactccatcaaaagggtacctgtggaaggcacagctgaa atgtgcagccttccaaattaattattgttacaaaaaagatcatagttttc cctaatacattggctagggatactatgctgaatgagggtttcaccctgca gctgaaaattaagaactgtacgaaaaacagtatgtgggacccagagaaaa ttaagaagttttctcagggtcccacggactatttttcatacagtttttat tttaattcagcagactagaagagcaacaaacatggctgattcagtttttg tactatagaccttgttccatgtatgaccttgtctttaaaagaactttggg ttttgggaactgccgatggggagtgtggccttttgctgaagagttttgtt ttccctttcagcttcatttcgaaagaaccatgagcgaacgacggtgatga cttgcggggaagatgcgacgcggttgcagcaggctgtggtagagtgttaa gtgaatgcagaaaggaagaagcaaaggttggcctgtaggatcagttatca gtctagggtaaaggaaggttgtgtggcacggtttggttacgtacttgtga tgtgttgttgtgttcttctcgtccgtcctactatgtaatatgtatgtgta aggttcaagtttgatgcttcgtcgtaagtgttttatggctgtgatatgta cttgggcaa

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.