GrainGenes Sequence Report: DQ492705
Sequence
DQ492705
External Databases
Data at GenBank Data at EMBL Data at DDBJ
DB Remark
Locus Source: Hordeum vulgare subsp. vulgare (domesticated barley)
Species
Hordeum vulgare subsp. vulgare
Cultivar
Orria
Chromosome
5
Data Source
genbank Downloaded 2008-2009
Title
Hordeum vulgare subsp. vulgare cultivar Orria MADS-box transcription factor BM5A (VRN-H1) gene, intron 1; and transposon MITE, complete sequence.
Strain
vulgare
Gene
VRN-H1
Remark
DB_xref: taxon:112509 Feature: intron: gene = 'VRN-H1'; Feature: repeat_region: rpt_type = direct Feature: repeat_region: mobile_element = 'transposon:MITE' Feature: source: mol_type = 'genomic DNA'; map = '5HL'
EMBL Feature
repeat_region 445 446 Location: 445..446 repeat_region 447 488 Location: 447..488 repeat_region 489 490 Location: 489..490 feature_gene 1 1170 MADS-box transcription factor BM5A; HvBM5A; HvAP1a; VRN1 Location: <1..>1170 intron 1 1170 1 Location: <1..>1170
DNA
tgatgaaactccgaaatgaagagtcaaaccaaaaagtagagagttccttc
caaataaatactataactagagtttctgcacacctttcccctttcaaaca
tcctagtttgcttgtgatatttgttggtgctggcgatggttcttgacaaa
gtaaaggagtcaataaaatcatggagactgatccattctttcccccaccc
gctgacattagcccatgtcagtttccagtttctatcagcttcaataattc
tcgtccagcgaattactagatcaaccttcacggattcaaagtaagaaata
gcataccatcggaatggccgctactgcttagtaaatatccattgttgttt
gtaatgttgctgagaaagcaacatggccatttgcttcatggaaaggacgt
gtatgttgaggtgttaaatctcttctactccctttgtacccaaataattg
taactgaggagaactagctagttctccacagttacaattatttaggtata
gagaaagtagttttgtacctctgagggtatgagtggcgctagtagaaaac
tgtaagcgaaatttgattggtttaccttcagcctccttggttgtttgatg
cataggtgcttgcatgcatgcatcaagctggtcacgtgatgaaacgcgta
agaatcaaagtcggttaaattaagatataaatagatacagtcatatttta
agctagtgctgcactgtgaacttcagtatctcagatcaaagtattgaata
aaatccccctgtttctgtgctgttcatttggaaaagaccgccatgaacat
ccgaattgatggccatgcatttatcagtttgccggctttattttcttctc
tgccgttccttgtcatttggtttgctttgcctacctctgcatgatagcca
cttgtaagtaactcacgggacaagtaaatgctatgcttaacctatgagac
tacacgctaatgcggaccccgacatggaagacattgtgaatgcggacgcg
tggggtcagctccaaacggtaagcaactgtaccaatttttgcgaggactt
tgaaaggcccataatatttgggagccaatttccctttagcgcctgctcca
aggaaggccgccggccggtgttgaagacggagccaaacccagtcgccaac
atcaaaagaaagggcctgat
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: DQ492705
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||