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GrainGenes Sequence Report: AY642925

Sequence	AY642925
Subsequence	AY642925_1.cds 172 3321
External Databases	Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index	TC167376
DB Remark	Locus Source: Hordeum vulgare
Species	Hordeum vulgare
Data Source	genbank Release 145, Dec 15 2004
Title	Hordeum vulgare BAC 124C9, complete sequence.
Clone	BAC 124C9
Gene Product	putative glutamate decarboxylase
Remark	DB_xref: taxon:4513 [ Show all 8 ]
EMBL Feature	repeat_region 3751 3909 similar to TREP30; class II MITE Location: 3751..3909 repeat_region 5523 12258 class I LTR retrotransposon Location: complement(5523..>12258) feature_gene 172 3321 Location: complement(<172..>3321) LTR 5523 7343 BARE-1_124A1-1_3'LTR Location: complement(5523..7343)
DNA	aaccccttttattaaaaagaaacagatacataaccacatgcccagcagag ccgaaagagagaatgcaagcaatccgcgtacgtacgtacaaaataattat ggtactacaagatacaacatagacgtaaatacgtgatgaaggacagagca agcgtctcagcaaacaagccttcagcatactccggccttcttcttccccg ccaggtccttgaaggcctcggtggcggcgtcgaccgcgctcttactcgcg ccgtccccaccagcggcggcggtggagagcttgatggcgtggacggcgtg cgcgtccagctcgccgatgatcttgttgatgtcggcgaggagccgctgcg cgaggctccggttgaagtcctcccggatgactatgcggagcacggccaca tgctccgcgtcggcgggcatggtgtacgccggcacgatccacccgaaccg cctcaggttctccgagatgtcgaacacgctgaagttggtgctgtccttga gccggatggccaccagcggcacgccgtccgccttggacagcacgtcgaac cgccccgtcgcgtcgatgccctccttcagcaccgccgcgttcagcttgca gttctccatgatgtgcttgtacccctgtgaagtgggtgaaggaagacgtc agtcaaacaccaaccaaactctctgcatcttgcaaatgagatagggaatc atgctgaaggtcagctggctgacacgcatacctcgaagccgaggcggatg agctgatagtattgcgcgatgatctggctagcacctgcacagaatccaca cggtaggcgcctaagttgttgcaacatcacagagaaatcatgctgaagca gagaacaatatactgacccttggagaagttgagcgtgaatgtgggctgat ctgctcctagatagtttatgtggaaaatgagttcttcgggcaaatcgtcc ttgctccgccagatgacccatccaacaccagggtacacaaggccatactt gtgcccactaacgttgatgctcttcaccaatggtagcctgaagtcccatt caagctcaggctgaagaaacggagcgataaatcctccgctggcagcatca acatggatcggcacgttccacctgcgttacgtgtatgatgataagacatg tcttaactgtgttgcattgctacctaaacaatttggtcaactaggatagt atttgtgtactgtgctgcatactacctgcacaatttcaatgaaatttatc gaattgggatatgaaattgacagcctataaaatacataccctgtttcctt gttcttctccacaagaaggtcattcaacagtttgacatcttcgtactctc cagtgagagtagatcccaggatggcggcgacacatatagtgttctcatcc accatttcaacagccttcttaggatccatgacatagtacccttcagtcaa cttgacctccttcaattccacttcaaaatacctagcaaatttctcccagc aaacctacgagcacgagaggtcgggttacgagcagcaaattttctggcac atacatacagtgataataaagttcaaaagatttcactccacaacaaaata cctgaacatttgcaccagtaacaatgttaggtttgtcgcatggcttcccc tgctccttcattttgttcgcccacttcctcttgaacgccaggcccgcaag catgattgcttccgaagaccccaccgtcgagactccgatagccgtctcgt cctcgccgatcggtgcattgaacaagtgagctatcatgtttacgcaacgg ttctgcgaaattacagacaggtaataagcaaagtgcttaaagtacacagc tcgtctatgaattcccatgtaggtgcatgacaatgcaaagaggcatccac atataagcggatcaagaggcccccctccaacggtttgtgacgtttcacat gctctgcttgcaactaacaggcatggcgcccaccggaaatcatttttacg agccactccctccgtcccttgatacaagacgtttctttgcagttcaaatt aagggacagagacagcatttgcaatcgttgttactggcaaacagtatcga aatagcgtacttgtttccaggtgataactgaaacagaaagagtcttagta tacttgtttccagattcagctagaccgtcaactgtgaccggaaaccaggt gaaagaaaaccacagaatgccatgtgacgcgggccgtagcagagcagaac cgtccgtgtcacaactagtccagggctcaaccaccatacggaacaaaaca tcacattcccatttgctgaagtaaacacgattcggcggtcactgatgctc tacacgcacaatcagccagcaaattgtggtttcaagaaggctgatgacag gcggccagtgggtcgcaaagcagagcagggatagaagggagcagagcaaa gcagagcgttttaccaaccaaaaccgcacgagtgctgggatctcgggccc tgccattcttaggagattttgctggtagtggttgtgaacgaacatggcgg cagtattaaaagtgttggagattgtctgttgccccgaaatagcaaggagg aattaaataaataggaaggggagtgtcggatcagggggtttcccggacct ggagctcggtggtgacggggtactcgtccatgtcgacgtagttcttgttg acggagtccatgatgagcttgccgcactcgggctccatccaggtggtgac gaaggacgccaggttcagccgcgggttgccgtccagcatcagctcgtcgc tgatgatctggtacgccgcctccttggggatcgagttctccggcatccgg tacctgcaccaacacccgtccctcagtcagatctccggcgagaacccagg ccgacgtccggttggtctctctctcgtacgtcctcaccgcgggagctcct cgcgcacgtagcgcgaggagaaggtggagtagacggactcccccgcgctg gagctcgcgtgcgagatcaccatggccgccggcgctcagctgctgctgct actgctccgcgctagggaatccggggatggatgggagggagaagggatgg ggtggggtgtcacaccgacggtgtgtgcgctggtgccttgtagtgaagtg gtggtggtggggtagtgggtggccggttaccggtaggagtaggcgtggtg tgtggagcagaggggaggtgactgaccgggggagctggtcgcggacgtag cgggaggcgaaggtggtggagtgcagcgtctcggccgtgtccggccccgt cgctgccacggtcaccaccatcgtcctccgatcactgtcgcgggcaccac cgggacagcgacggcgagtcggccgggaatctgtgctccgcgagtgaatg gaggcggaggttggcgtgctctctctctcggtctcgatccgccgaccggc gcggccattttgtttagcgcggcgaggcgccacgtacgcgcgcgccgtgg cacgcgtcgcgccgcgaggcggttgcccgcggtgagctggctaggccagg ggagggtagccggtggggaggtcgacgcgtgccggtgccaacaacatgtc cccgttggagacaaaacgtatttaatctgctcggtcgactgagatccccg gtgtaacctcggccatgcgctcatgatacccacgcaccagtgcagtaatt tttcattaacaaatacagtagtatacaattaagtgctgcataaatagtta cttccccgtttttaaatataagtctttaaggaggtttcattagtggacta catacggatgtatatagacatattttaaagtatagattcatttattttgt ttcgtatatagacttctaataaaatatcttaaaagacttatatttaagaa tgaagggagtaaaactaataaaaaaatacaaatgtactacacttaaatat ttgtttctgaaaaatagtctgtataaacttataaaagttatacaaaacat tttacaaatacatgtattacaataattaaaagttatgggatcactctttt tatgagagcttttcaatctatttgtaattagtaatggcagtacaaagaac atatgttataaaaattacaaccaggttaacagcgacagctacaagtactg catcgagtcgaatgcccatcccgtcacatgcggatctagaacgtctctag caaaccgtgtaatagggttgaacccggataatttcgatgagtgtacggat ttgatctgttttgctagtcagaacagaccgcgcatcgcgtatctgatccg taattttttaccgtggctcggaagaaaacaaacctcaaccggtatatatg ctcttaggcccagtcagcccgggcggctgccttggcgtgtagatcatttt cttcgttgactatagctatagtgtggcactctagctataatactggaaga tggtgtgaaaaggcatgggacctgtcatatttaggtctgccattgcatct cgtcatcgtcttcttttattaaagtcagacaaaaccttattatagtagac agtcaaaaaaccatcatactaaagactttaaggaacagcgcacgagatca gtaactaccaccgatgaagagagtcgtagactgggaagattaaacgagta accacgcgaacgaaggcgaaaaatattagacccaaacagttccaccgaag accaacaccgagaagtacgtcggcgaagaggcactagggatggggaggcg tatatgtagcaatgggcagcccggcccgaccttgcccatgcccgggccta aattttgagcctgaagagtatttcgggtagggcatgggcttgctgttttt gcgttttaaggaaggggcccgacccgaggcccgaagcccgacaaaaatta gcagtgatgggccggacctgggcctgagatctaggcctgacggccggacc gggccgggctcgagcctaggttttctgcgtcgggcttgcgctggtgcctt gtagtggagtggtggtggtggtggggcagtgtcgtccgtagtgggtggcc ggttaccggtaggagtaggcgtggtgtgtggaggtgagggaggggactga ccgggggagctggtcgcggacgtagtgggaggcgaaggtggtggagtgca gcggatcggtcgtgtccggccccgtcgctgccacggttacgaccatcggc ctccctccctcgtcctcgctgtcgctggcaccaccgggacagcgacgacg agtcgaccgggaatcttttctcttctccacggaggagtgaaggcggatgt tggtgtgtgctctctatctctcggtctcgatcgaccgaccgacgcggtga tgggacgttgctttctttttgtttactgcagtgaggcacacgtacacgcg cgccacgacacgcgtcgtgccgggagctggctacaagatagccggtcacg cgaccatttattattttccattattttcactgtacgacaggaggggcaat gctacgtgcccggtgggaaggttgttggggaacgttgcatgggaaacaaa aattttcctacgcgcacgaagacctatcatggtgatgtccatctacgaga ggggatgagtgatctacgtacccttgtagatcgtacagcagaagcgatta gagatcgcggttgatgtagtggaacgtcctcacgtccctcgatccgcccc gcgaacaatcccgcgatcagtcccacgatctagtaccgaacggacggcac ctccgcgttcagcacacgtacagctcgacgatgatctcggccttcttgat ccagcaagagagacggagaggtagaagagttctccggcagcgtgacggcg ctctggaggttggtgatgatcttgtctcagcagggctccgcctgagctcc gcagaaacacgatctagaggaaaaactatggaggtatgtggtcgggcagc cgtgagaaagtcgtctcaaatctgccctaaaagccccatatatatatagg aggagggagggggaccttgccttgggtccaagaagccccaagggggtcgt ccgagccaaggggggaaggtctcccccccaaaccgagttggacttggttt ggtgggtgggagtccttccttcccttcccacctcctccttttttttcttt ctctttgatttttcttccaatgcgcgtagggcccttttgggctgtcccac cagcccactaagggctggtgcgccaccctcaaggcctatgggcttccccg gggtgggttgccccccggtgaactcccggaacccattcgtcattcccggt acattcccggtaactccaaaaatcttccggtaatcaaatgaggtcatcct atatatcaatcttcatttccggaccattccggaaaccctcgtgacgtccg tgatctcatccgagactccgaacaacattccgtaaccaaccatataactc aaatacgcataaaacaacgtcgaaccttaagtgtgcagaccctgcgggtt cgagaactatgtagacatgacccgagaggcttctcggtcaatatccaata gcgggacctggatgcccatattggatcctacatattctacgaagatctta tcgtttgaacctcagtgtcaaggattcatataatcccgtatgtcattccc tttgtccttcggtatgttacttgcccgagattcgatcgtcagtatccgca tacctatttcaatctcgttaccgggcaagtctctttactcgttccgtaat acaagatcccgcaacttacactaagttacattgcttgcaaggcttgtgtg tgatgttgtataaccgagtgggccccgagatacctctccgtcacacggag tgacaaatcccagtcttgatccatactaactcaactaacacgttcggaga tacctgtagagcatctttatagtcacccagttacgttgcgacgtttgata cacacaaagcattcctccagtgtcagtgagttatatgatctcatggtcat aggaataaatacttgacacgcagaaaacagtagcaacaaaatgacacgat caacatgctacgtctattagtttgggtctagtccatcacgtgattctccc aatgacgtgatccagttatcaagcaacaacaccttgttcataatcagaag acactgactatcatcgatcaactggctagccaactagaggcatgctaggg atggtgttttgtctatgtatccacacatgtaaatgagtcttcattcaata caattatagcatggataataaactattatcttgatacaggaattataata ataactatacatttattattgcctctagggcataattccaacagtctccc acttgcactagagtcaataatctagccctcacatcaccatgtgaattaca ttgtaataaatctaacacccatacagttctggtgtcgatcatgttttggc cgtggaagaggtttagtcagcgggtctgctacattcagatccgtgtgcac tttgcatatatttacgtcctcctcctcgacgtagtcgcggatgaggttga agcgtcgtttgatgtgtctggtcttcttgtgaaaccttggttcctttgct aaggcaatggcaccagtgttgtcacagaacaaggttattggatccagtgc atttggcaccactccaagatccgtcatgaactgcttcatccagacaccct ccttagccgcctccgaggcagccatgtactccgcttcacatgtagaatct gctacgacgctttgcttggaactgcaccagcttactgcacccccattaag aataaatacgtatccggtttgcgacttagagtcgtccggatctgtgtcaa agcttgcatcgacgtaaccttttacggcgagctcttcgtcacctccatac acgagaaacatctccttagtccttttcaggtatttcaggatattcttgac cgccgtccagtgatccactcctggattactctggaacctacctgccatac ttatggccaggctaacatccggtctagtgcacagcattgcatacatgata gaacctatggctgaagcataggggacggagcgcatatgctctctatcttc atcagttgttgggcactaagtcttactcaatctcgtaccttgtaaaactg gcaagaaccctttcttggactgttccattttgaacctcttcaaaacttta tcaaggtatgtgctttgtgaaagtcctatcaggcgttttgatctatccct atagatcttaatgcctagaatgtaagcagcttctcctaggtccttcatag agaaacttttatttaagtaaccctttatgctctccaaaagctctacgttg tttccaatcagtaatatgtcatccacatataatattagaaacgccacaga gctcccactcactttcttgtaaatacaagattctccaaccacttgtataa acccgaatgctttgatcacctcatcaaagcgtttgttccaactccgagat gcttgcaccagtccataaatggatcgctggagcttgcataccttgtcagc atttttaggatcgacaaaaccttcgggttgcatcatgtacaactcttcct taaggaaaccgttaaggaacgccgttttgacatccatctgccaaatttca taatcgaaaaatgcagctattgctaacatgattctgacggacttaagcat cgctacgggagagaaagtctcatcgtagtcaattcctggaacttgtgaaa aaccctttgccacaagtcgagctttataaacggtcacattaccgtcagcg tccgtcttcttcttaaagatgcatttgttctgaatagccttgcggccctc aggtagtatctccaaagtccatactttgttctcatacatggatcctatct cggatttcatggcttctagccatttgttggaatctgggcccaccattgct tcttcataatttgcaggttcattgttgtctaacaacatgattgtcaagat gggattaccgtaccactctggagcagcgcgtgatctcgtcgacctgcgtg gttcaacagaaacttgaactggagtttcatgatcatcatcattaacttcc tcctcaaccggcgtcgcaatcacaggggtctccccttgccctgcgccacc atccagagggatgagaggttcgacaacctcgtcaagttctatcttcctcc cactcaattctctcgagagaaactccttctcgagaaaagttccgttctta gcaacaaacactttgccctcggatttgagatagaaggtgtacccaactgt ctattttgggtaacctatgaagacgcatttttccgctttgggttccagct tttcaggctgaagctttttgacataagcatcacatccccaaactttaaga aacgacaactttggccttttgccacaccacagttcgtatggtgtcgtctc aacggatttcgatggtgccctatttaaagtgaatgcagctgtttctaatg cataaccccaaaacgataacggcaaatcagtaagagacatcatagatcgc accatttctaataaagtacgattacgacgttcggacacaccattacgctg tggtgttccaggcggtgttaactgcgaaacaattccacattgttttaagt gagtaccaaactcgaaactcagatactcacccccacgatcagaccgtagg aacttgatcttcttgttacgatgattttccacttcactctgaaattgctt gaacttttcaaatgtttcagacttgtgcttcatcaagtagacataaccat atctacttagatcgtcagtgaaggtgagaaaataacgatatccgccgcgt gcctccacgctcattggaccacacacatcggtatgtatgatttccaacaa gtcactcgcacgctccattgttccggagaacggagtcttagtcatcttgc ccatgaggcatggttcgcacgtgtcaagtgaatcaaagtcaagtgactcc aaaagtccttcagcatggagtttcttcatgcgctttacaccaatatgacc cgagcggcagtgccaccaaaaatatggtgctatcattgtttactctaact cttttggtctcaatgttatgtatatgcgtatctctatcaagattcaatat gaacaatcctctcacattcggtgcatgaccataaaagatgttactcatag aaatagaacaaccattattctcagacttaaaagagtaaccgtctcgcaat aaacaagatccagatataatgttcatgctcaacgcaggcactaaataaca atgatttaagttcatcactaatcccgatggtagttgaagtgacactgtgc cgacggcgattgcatcaaccttggaaccgtttcctacgcgcatcgtcact tcgtctttcgccagccttcgtctattccgcagttcctgcttcgagttgca aatgtgagcaacagaaccggtatcgaatacccaggcaccactacgagagc tggttaagtacacatcaataacatgtatatcaaatatacctgatttctct ttgcccgccttcttatctgccagatacttggggcaattgcgcttccagtg acccatacccttgcaatagaagcactctgtttcaggcttaggtccagcct tgggtttcttcggcggattggcaacaggcttgccgctcttctttgaattg cccttcttgcctttgccgtttctcttgaaactagtggtcttgctgaccat caacacttgatgctctttacggagttcagactctgcgactttcagcatcg caaacaactcgccgggagacttgttcatcccttgcatgttgtagttcaac acaaagcttttatagcttggcgggagtgattgaaggattctgtcagtgat agcctcttgcgggagttcaatccccaggtcagctagacggtttgagtacc cagacattttgagcacatgttcactgacagacgagttttcctccatcttg caagcatagaatttatcggaggtctcatacctctcgatccgggcgttctt ctgaaagataaacttcaactcctggaacatctcaaatgctccatgacgct caaagcgacgttgaagtcccggctctaagccatacaagactgcacattga actattgagtagtcctccttacgtgctagccaagcgttcttaacatcctg atcagccgtagcgggtggttcatctcctagcgcagcattaaggacataat ccttctttccagcttgtaagattagcttaagattacgagcccagtctaca aagttgcttccatcatctttcaatttagctttctctaggaacgtattaaa attcaggatgactgttgcgtgagccatgatctacaacacaaatatatatt caaagtggacttagactatgttcaagataattagagttcaacttaatcaa attacatgctaaactcccactcaaaaagtacatctctctagtcatttgag tggttcatgatccacttacactatcccaagtccgatcatcacgtgagtcg agagtagtttcagtggtaagcatccctatgctaatcatatcaactatatg attcatgatcgacctttcggtctcatgtgttccgaggccatgtctgcaca tgctaggctcgtcaagcttaacccgagtgttccgcgtgcgcaactgtttt gcacccgttgtatgtgaacgttgagtctatcacacccgatcatcacgtgg tgtctcgaaacgacgaactctcgcaacggtgcacagtcggggagaacaca atttcgtcttgaaattttagtgagagatcacctcataatgctaccgtcgt tctaagcaaaataaggtgcataaaggattaacatcacatgcaattcataa gtgacatgatatggccatcatcacgtgcttcttgatcttcatcaccaaag caccggcacgatcttcctgtcaccggcgccccacaatgatcttcatcatc atgatcttcatcaacgtatcgccatcggggttgtcgggctactcatgcta ttactactaaagctacgtccttacactatagtaaacgcatcttgcagcac caaccgttatttaaagaaaaccccttgggttctggtgggtggcgaccatt gacatgcaagtcgatttttacttttcaccatgacattttatacttccatt tttcccatgaaatcgttgccttatcctttccaagcttcccctgcaaaaac aatttaaa

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