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GrainGenes Sequence Report: AY747600

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Sequence	AY747600
Subsequence	AY747600_1.cds 508 11921
External Databases	Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index	TC290491
DB Remark	Locus Source: Triticum aestivum (bread wheat)
Species	Triticum aestivum
Cultivar	Triple Dirk C line
Data Source	genbank Release 145, Dec 15 2004 genbank Downloaded 2008-2009
Title	Triticum aestivum cultivar Triple Dirk C line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence.
Gene	Vrn-A1 (Triticum)
Gene Product	VRN-A1
Remark	DB_xref: taxon:4565 [ Show all 8 ]
Allele	Vrn-A1a (Triticum) [ Show all 11 ]
EMBL Feature	repeat_region 4718 4797 flanked by TA host duplications Location: 4718..4797 repeat_region 4963 6446 similar to Solanum demissum polyprotein, GenBank Accession Number AAT40504.1 and to repetitive elements in Aegilops tauschii, GenBank Accession Number AF091802, and Hordeum vulgare, GenBank Accession Number AJ001317.1 Location: 4963..6446 repeat_region 7352 8157 similar to Hordeum patagonicum Sukkula retrotransposon, GenBank Accession Number AY054380 Location: 7352..8157 feature_gene 508 11921 Location: <508..>11921
DNA	gctctttcccttcttctaggcctagggtacagtagaatattatgaaagga aaaattctgctcgttttttttctctgtggtgtgtgtttgtggcgagagaa aatgatttggggaaagcaaaatccggagattcgcacgtacgatcgttcga cacgtcgacgcccggcgggcccggggtggggcatcgtgtggctgcaggac cgcggggccccgcaaagcgggccgggccaatgggtgctcgacagcggcta tgctccagaccagcccggtattgcataccgcgctcggggccagatccctt taaaaacccctccccccctgccggaatcctcgttttggcctggccatcct ccctctcctcccctctcttccacctcacgtcctcacccaaccacctgata gccatggctccgccgcctcgcctccgcctgcgccagtcggagtagccgtc gcggtctgccggtgttggagggtaggggcgtagggttggcccggttctcg agcggagatggggcgggggaaggtgcagctgaagcggatcgagaacaaga tcaaccggcaggtgaccttctccaagcgccgctcggggcttctcaagaag gcgcacgagatctccgtgctctgcgacgccgaggtcggcctcatcatctt ctccaccaagggaaagctctacgagttctccaccgagtcatggtaaatta agcacgcgctgtctttaaatttgttccccaatacgccttcgatttcgatt tcctgcgcaccgttctggtcctgcgagacgacccggccgaccccagggcc ttctccatttccgcgctgctgtttggtagattccgtttgcccgctcgctg tttccatccgattctgccgtggctgcttgctcgtttttcttagaatcgat gggggagctggcgttccgcgcggccgcgatttcttgctatggggggtagg gcgcgcgatgggtcgccgggctattttatgctccgccagcgccgggaagg ttgttcatctggcgtattttggggaaattttggtcccggacgcgccaggt ggcaccccaagtggaagggttaagacggtaatctcttgatatttctatcg ggctggggttatttacgtaaaaaatatatatggggttaaagtgacatcgc aatttagcatgctacctcatcttctcatttggaatcttaactagacgcta caataccttgttgtctccctcatcaaatctgtgcttgctgcttgaacaaa tgaacctcgtcatctcggttatttccagaattttgttccacaggctttgc tatcattcatattggtagctccggccatgcggccattttgttgcttgctt ggagatactgtctacggcacgcacggagaaaagagtcacttgaccagcta atgcatggaattattgtctgcagctgatgaaactccggcatgaagagtca aaccaaaaagtagagagttccttccaaatataaaataagagtttctgcat actttttttccctttcaaccatcatagtttgcccgtgatatttgttggtg ctggcgatggttcttcacaaagtaaaggagtcaataaaatcacggagact gatccattatttcccccacacgctgacattagtccatgttagtttcccat ttctgtctgcttccataattcccgtccggcgaagtactagatcagcctcc acggtttgaaagtaagaaatatcataccgtcgaaaggatcgctactgctt agtaaatatccattgttgtttgtaatcttgctgagaaagcaacattacca tcagcttcatggcaaggacctgtatgttgaggtgctaaatctcttctagt tttgtaccactgagggtatgcgcggcgctaacggaaaagggtaagtaaag ttttattggcttgccttcagcttccttggttgtttgacgcataggtgctt gcatgcatgtatcaagctggtcacgtgatgaaaacgcgtaagaatcaaag tcggttaaattaagatataaatagatgcagtcatattttaagctagtgct gcactgtgaacttcagtatctcagatcaaagtactgaataaaattacccc ctgtttccgtgctgttcatttggaaaagactgccatgaacatccgaattg gtaaccatgcattaatcagcttgccggctttattttcttctctgtcgttc cttgtcatttggtttgctttgcctacctctgcacgataggcacgtgtaag tagctcacggggacaagtaactgctatgctttgtctagagcctatgagac agcacgctgatgcaccacgatattccatggtttaggatcggaactaaaat cttgagatcttacaatattctaaaaaggcatctatagcctgcatataacc gactcaggcacaaaatcagcattgatcgagcaggcatcatatgcatacac taaaatgcagctaatgatgtagcctgctgattttctggacctggcttgga taatggttaatgtacccaattgttattcactctatatcctccatctcctt atcggtcgattaatttaccacacatagcaaaggtccaaagctgacattgc aaccaactttactcatctctagactagtaaacacgaagtaagctgttagg gactgtgtgatgggtctatgttacatgcatttgttgtcggtctagtactt aaccaagtctgggaaccagttatcctctacacctattgtgtccctaaacc tatatacttgagagtaaaacagaagttattcctaggaatatctgactaag ctatgggatagtcaacttccatttttgctcctgccacatctttacttagt ccacaaacgacatatagatgatcagctagaaccgttatttagagtttata tctgctcattacatgtattaattccatgaaatagaagaaaaactgaatag gcacacaatatagttgaagctcggcagatgacttcataagtgtcatatct attaaccatttcacatattgttacatttttgctgcagtgatattttgtta gctcccagttacaagttaactaatatatggagatcctgggcacgtacatg taagcagatcctatcgactttcgtggatccgctgatggaatcacacctca ggatttcatggcatagtcttgatatgtcacgaactggttgttactttatt tatttattttacactgtgttcgcccacccagatgacagaaatgttatgta tttaaaatgtaatctcacagtcattgttgttggtatggaccgtatgccaa aaagggttttaccatgaagtctattaatgaataattatttatgttacaac ttgattgctttacattagttaaaattagttattttgtacctttgtgcccc ccttcttgttcaaccatttatcttaccaaactatgcatcaacaaacatgc acagtcactattcataaatttcatattctcaaaatttaaatattaagaac aaaagttatgtttctactttttccaactaacaattctctgaactcaaatt ttataatttgaaattttaatattaacattttattttaaaactttttgaat ttcttttttattataaaaaagtttggatggcataaatttatgtatgaact attatgaaaccacaagcaataacgaaagtgtgtttttaagcaaaacctta tgacccatcactcaaatagtttgcgtttgattttcaaattgacgcgcatt aaagacatatacatgcagtcttcatatcacatgtgtgcttttcctgctta aggtagtaggactatctcttttttgataaacaccgattacaacgtagatg cacacacaagtgcacattaccaccacacgtacacactcacacaatgttta gtaaggactaaaattgtggagcttcaagatctctggaacgtcaggaatgt cgcctcccacggaacgaataatccgcacagtgtgtcaaaccattggttcg atcttccttggtgggctgtgagtcaaggtactaaaaaagcggtaggcgct aatctgaattttgcctatgcctagtgcaatgaccgcctaggcgcacttat gccttcgtatgacaaagaaggagattttacaacaatgaaatcaatggtgc ggagcctagagggaggtatcggtggtgagttggagtgagaaatccctcct ctgattcaacctttcttgacaacatagcccaaacaagaccgtccattttc tttgcatcccccttttcccgtctctttgtatcgttaggtctctttcattc gtcatttgtatgtagcgataatggtggtgtctgcagcttcttccctgcat tcgcttctcctttcctaccgtcgccggaaaaagatctcatcggtcatgga gaacatagtcgggcgcctaaaccttggcctatggcaaaagtgaggcggta gtctgcttagcgcctaagtggctccttttcattgtccttttttccatgtt gggagtacaaccgcactcctaacccactaaccatagattggttatcatct agtactttctgtaccacttttatcttacaaacgcgagggtattgtggtgg agagccatgtattacaactttgataatcaaaattcaaaattcaagtctct gaagatcctttgaaaaatgtgttttgtcaagggcaaaaaatatatctttg tttgccataccaagatactccctccgtaaagaaatataagagcgtttagg tcactacttgagtgatctgaacgctcttatatttgtttaccagggagtac aaaagaccatattcttgcactaatttttactagtggttatgcccgggcat atgagggtcgggaaggaaggcgcaagggacatctagtaaaaattagtgag agaataaccgcaagggacattgtgcactaatgtttaccagggagtacaaa agaccacattgtgcccgggcatatgagggtcgggaaggaaggcgcaaggg acatctataagatggctaagatcgtgaggaaggcgagggatgtcaaacaa gtcaaatgcatcaaggatagagcagatcaactcctggtgaaggacaagga gatcaagcatagatgacaggagtactccgacaagctattcaatggagaga tgaatctaggggtctgagattagggaggctttacaaagaataatgttata ggagtcattgggcaccacttaagagtaatggcaagcgtgaccaaaaatca gtttgttttcatgcctgagaggttgatcatggaagtcattttcttggtat gaaaacttatggagaaatacagggagcaaaaagaagacttgcatatgatg ttcattgacttgaaaaagtcctgcaataagatactgcaaaatgtcatgtg gtggtccttggagaaacacaaagtcccaataaagtacattactctcatca aggacatgtacgatgatctcatgacaagtgttcaaaaaagtgatggcgac actgatgaccttccgcataaaataggacagcaccaagggtcaacttcgac cccttatctttttgccttgatgatggatgaggtcacaagggatatgcaag gagatattccatggtgtattctctttacgattgatgtggtgctagtcaat gatagtagctcgaggcataatggaaagttagagctatggagacaaacttt ggatcaaagtttttaggcttagtagaactaaaattgagtacatgaggtgc ggtttcagtactacttggcacgaggaggttagcctcaatgggtaggtggt acctcagaagggcaccttttgatatttgggatcagtgttggaaaaggatg ccgatattgatgaagatgtgagccattaaatcaaagtcggatggaggaaa tgatgccaagtttctggtgttctctcttgacaagatagtgccacgaaagc taaaagacaggttcgataggacggcgccccgcaatgtatggcgctgagta ttggccgactaaaatgagacatattcaacaattgggtgtagcagaaatgc gcatcttgagatggatgtgtggtcacccaagaaaggatcgagtccaaaat gatgatatacatgtagagtcggggtagcaccgattgaagggaagcttgtc gaacatcgtctgagatggcttggatatatacaaagtaggcctttagaaac tttcgtgcatagcaggcggttaatacatgctaataatgtaagagaggttg ggctagaccaaacttgacatggaaggagtccgtgaagagagatctgaagc actaaagtatcacacggaactagtcatggacaggggtgtgtggaagttag ctatccacacgccagaaccattacttggttttgagatcttatggagttca gctctaccctatccaacttatttgggactaaacgctttgttgttgtatct cttgccttggtcttagcaacttaccatgtgcatgtcttttctcaaaaagg aaaattgaatgccaagtatttcctgaagttgtacattgtacaatttgatg tccttgctccacggtacatcagatttcccatctcatgatgatgcaacaac taggtcttagagcaactctagcagagtcttcatggcttccgtcgctatat ttcttttatctcgctccatacacaggtctcgtggcctccatatttggagg ttggagaggtccagtaaggagctcgccccaaaaccaaccgctaaagtttt aagcttcctcctcgcgcctcctgtcggatttgaagcaacccgcgccctcg gattcctatggcggtccattggatgaccgccatgcggcatcatcttcttg cttgcatgtgagcagactggaggtgtgcgagtaggtcgctgcagcatttc tcatagggaggcgcgcccttcgactacccgccattagctgccacccgcgt ccccaagtgcctccctaatggcgcctgcggtggcctgtaaaaggccggcg ccctccgctctctagcttcaatgctatcttcgacgcctcttattccaatc tcacacgcctccaatccaccatcccctttgtcgtccacagcgcatccaga ggagctccctctcgccttcaatttttggcataaggtggaggagtagcccg cggatcctttgcccccctttagggaccagacggacctagtcctggagggg ggctgcgcagagcaacttgtagcacccaagattctatcccgatcacgtga tgaattcatgatcggagcagaatcgcatttcgagcgcatagcgagctgga tatcattacaacataccatgcactaaatagatgagaataccagataaagg tttacactcgccacaagctacaacatgaatacatcaatacacaacaatca tcatacaggagagcaggatccgactatggatgaaatcaaacaaaaagaag aacgacatctaccctgctaatcccgggctcctgaactggaacccatccta tgatcgacgaagaagcagaagaagaactccaaaagcaaacatgcatcgct ctcacgtcaagcatttctttatctatacctgcacctgttgtagtaatcta tgagccatggggaccagcaatctcattaccaagggtagcaaaactagcaa agattaatgggtatggaagggttaagtggtgaggaggctggaagcattaa gcatttgtatggtggctaacttacgagtacaagagtaagaagagtaaact acatatagcggtcgcaaactattaatgatcaagaagtgatcctgaactac ttatgagtcagtcataaccccaccgtgttcacttcccgaactccttggaa aagagacgatcatgtaacgcacgcggttggtgtattttaattgggttcag tgtcaagttctctaaaatcggatattataaatttttaagtcgccacataa ccgcgggcacggcttccgaaaagatttagccctgcaggggtgcaccaagt agtccattataaattaccacatgcatccgatggaacatcctcacaccatg ataacacgatgcttacaataaggaaccccggtggacaagccattcgtcaa aggcaaaactaaaccagcaagaccacccggtgtgtcgtcaccccgataag agccgcgcctattttctagggttgcctaacccttgggatcccttggacca ccttactatgtgcatgttttcttttcacacgggcatttatctgctttggc atcaaagctttcatttgaaaatttgctactaccacctatatttgtactga caatacctttgcatggacccacacattaggttttaaaatggttctcacat tcgtgttgtcttacttatctaggcatggctcttgcccagataattgttgt tggtcacacccttctatattatcggtttgtgagtctagctgattggatac gtgagttgttgcacactcttgaactgattttgacttgatgaccattgtaa ccatttgcgggttataggctagcacatagttcaacactataactaattgt tggttcattcctactataggttatagggtagcgtttgacaattttccatg tgttgtgggtacttgtgacaattgaggacacgatgtttgtggtgacagag aacacgttgacctccacaaatagttaggatgctgggtaaagcctacggga aaacagggagaaggtataggaggagaataacatgagtagtaaaaaagtta atgacttaaatacaacatcaaggaacgtttcttaaactgaagctctagca ctatagttaaataatttgaatctggcagaaattatactaaccttgcctag cacaattccacccctaaacttctgttttgcaaatttcgttaagtctatag acagaagaaaagggtcactctattttcccaacaaaacttgaacaacacca gaaccttaatttgaagtcagtttcgtgctctttctatcatttacacgtca cagtgaaatgctttgcaaactatttgaccagatgctgtataccacatttg aatctcatttgcatatactgacatgaaacaacgcattacagaaaagcttc tgatatgtcaaaatgtatcatatatcaattcttgagattgtgcatatact ggacattaatcttgtttacatgtacttccaatgactagatatttctttct cttatgcagtatggacaaaattcttgaacggtatgagcgctattcttatg cagaaaaggttctcgtttcaagtgaatctgaaattcaggtaaaaatgaaa aacaagcggtttgctttcctttagctatgaaataaattgttgccgatatc agatgttctgaaatttatttgtaggccactatattttgaatgatttccat gcgctatgaagttaattgacttgcaactatggattgttggtctatttgat tctcttgtaacctattatcagtttttcttcgatgaatgcttaggcatggt cgaataatgtaaccaaataccacttgaccaatttactttcatggctactg aactagactagcatgctgattcgtacatactgcctttggaagaactacaa aaatgtgatctgactttaagagttactaaattagtacgtagtaaactgca atgcatggccagatcagcaattctggattagccggctgagtttttgaagg gcttagcaacaaaaattgacaagcttatatattataatggctttaaaata cttgtgtgcatcagtgaaaatcacaatattttgattgcaataacaaaatg ctatcctagattattaagacttgttactagattggtcattgatcttaagt tcttaggataaactgttgaatctccagtccttcggattgtattatgctac taatggccattaaggatagccccatgacattagttctcatctccaatttt tctgtattgtttgcgatattgctgcagtttcttattacagcttgtctaag gctaaccatctaggataaaaagtagattctgcagacttagaagatccagt taggctcaatattcttatttttgtaactcggaactccaggacctcgcttc aattttttggccaatttttgcacaaaccaagttgtagctccaactgaggg atccaaccagttctatctgattgctgacaaacagattcagcatgtacgta tgacgaggactatttaaacatgtaattactaacccaaaaaatattccaaa ttttatttaaatatttacctccgctgcagcatttttaatattacgaaata tgatttttacatctgatagtaacacttgttgcagtgacataattgatttg aagttatgaaaattcaagttcactgcacagaacaatccttcctgatttat gcccccggggtaaaggaggagggttgtgataggcttggcgagccaacgta aaaactcagccactcttatggagatgaaacccaaaagccaaagagctagc tatggacaggggtgcgtggaagcttgctatccatgtgccagagccatgag ttggttgcgagatcttatgggtttcacctctagcctaccccaacttgttt gggactaaaggctttgttgttgttggtggtggtggtggtgtcaatgttgt taaagtctctttgttcatttctgaactaacttagcctatttgtagcattt ctgtcattgttccttcctgtcccacccaaagttagtaatgcgattgttat ttgtttgtgcagggaaactggtgtcacgaatataggaaactgaaggcgaa ggttgagacaatacagaaatgtcaaaagtaatttgtaacgattttggttg attgccagtatattgtatacactctgaagataaatgggactgaatttcta catcctgcatctgcaggcatctcatgggagaggatcttgaatctttgaat ctcaaggagttgcagcaactggagcagcagctggaaagctcactgaaaca tatcagatccaggaaggtactgatttaaatgatttgatacagcagcacaa tatataaaaagaagaaaaacacttgcagagaagttcagcaaagtatatct gaaatcagattctagactgagatgttcaaaatatgtatatgcattttagt catatgctcttcatagttaaaaaaatgactaatttttttcattttttgta cttgcagaaccaacttatgcacgaatccatttctgagcttcagaagaagg taagctgtcaaccttgcataccttattcggtattcgaactggtcaacttg tcatgaagccttagcttgtttcaagatttgtgacattataacatgtatgc aagtaactggtctacatgcacgtaacctcattacatcgttcttgctgcag gagaggtcactgcaggaggagaataaagttctccagaaggaagtaagccc gttatatcaccttatggtccaaccggtctaaattgttccgtatagcaaat tttattgacagaggtccgtgtcccttccccacagctcgtggagaagcaga aggcccatgcggcgcagcaagatcaaactcagcctcaaaccagctcttca tcttcttccttcatgctgagggatgctccccctgccgcaaataccaggtg atgatgtacatcacaagtctaatcttattcagagttcaagtaaccatctt ttgaattggtcgggttgttccttgcagcccacttttggtctctatgcagt tctgtcgggccacatttaagtaacataatactaatatgcttgtgttcgct ttggttgtgcagcattcatccagcggcaacaggcgagagggcagaggatg cggcagtgcagccgcaggccccaccccggacggggcttccaccgtggatg gtgagccacatcaacgggtgaagggcatccagcccatacaggcgtactat tcagtagagggtaacaagttgcaccggccagcctggtgtatgttgcggtt gctagcacgcctgacccctttggaggggaaaggaaaagaaatcagagtaa agtagcaagctgcagcgatgtgtatatttcactttgtccacctcagtttc cctcccagctgggctgagatggctgtacgagtaatttaccatgtaatcta tatgtagcttgagtgatgaattttcaagtttccatgatacccgtctctac tgggtgttgtttatgtgaattaacctatcaaat

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