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GrainGenes Sequence Report: AY747601

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Sequence	AY747601
Subsequence	AY747601_1.cds 739 12152
External Databases	Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index	TC290491
DB Remark	Locus Source: Triticum aestivum (bread wheat)
Species	Triticum aestivum
Cultivar	Triple Dirk D line
Data Source	genbank Release 145, Dec 15 2004 genbank Downloaded 2008-2009
Title	Triticum aestivum cultivar Triple Dirk D line VRN-A1 (VRN-A1) gene, complete cds; and Stowaway MITE and gypsy retrotransposon Sukkula, complete sequence.
Gene	Vrn-A1 (Triticum)
Gene Product	VRN-A1
Remark	DB_xref: taxon:4565 [ Show all 8 ]
Allele	Vrn-A1a (Triticum) [ Show all 11 ]
EMBL Feature	repeat_region 4949 5028 flanked by TA host duplications Location: 4949..5028 repeat_region 5194 6677 similar to Solanum demissum polyprotein, GenBank Accession Number AAT40504.1 and to repetitive elements in Aegilops tauschii, GenBank Accession Number AF091802, and Hordeum vulgare, GenBank Accession Number AJ001317.1 Location: 5194..6677 repeat_region 7583 8388 similar to Hordeum patagonicum Sukkula retrotransposon, GenBank Accession Number AY054380; fragment Location: 7583..8388 feature_gene 739 12152 Location: <739..>12152
DNA	gctctttcccttcttctaggcctagggtacagtagaatattatgaaagga aaaattctgctcgttttttttctctgtggtgtgtgtttgtggcgagagaa aatgatttggggaaagcaaaatccggagattcgcacgtacgatcgttcga cacgtcgacgcccggcgggcccggggtggggcatcgtgtggctgcaggac cgcggggccccgcaaagcgggccgggccaatgggtgctcgacagcggcta tgctccagaccagcccggtattgcataccgcgctcggggccagatccctt taaaaaccggaaaaaaattatatgagaccaggtctcatataaatcaggtg agacccgccctgatgaatgacatgtggcattcacaaatcacaaagcatct aatctctccccccctgatttcaggtggggggtggggtggatgctttgtga tttgtgaatgacacgtgtcatccatcaggatgggtctcacctgctaatcc gtgagacctggtctcatagaatttttttccttaaaaacccctccccccct gccggaatcctcgttttggcctggccatcctccctctcctcccctctctt ccacctcacgtcctcacccaaccacctgatagccatggctccgccgcctc gcctccgcctgcgccagtcggagtagccgtcgcggtctgccggtgttgga gggtaggggcgtagggttggcccggttctcgagcggagatggggcggggg aaggtgcagctgaagcggatcgagaacaagatcaaccggcaggtgacctt ctccaagcgccgctcggggcttctcaagaaggcgcacgagatctccgtgc tctgcgacgccgaggtcggcctcatcatcttctccaccaagggaaagctc tacgagttctccaccgagtcatggtaaattaagcacgcgctgtctttaaa tttgttccccaatacgccttcgatttcgatttcctgcgcaccgttctggt cctgcgagacgacccggccgaccccagggccttctccatttccgcgctgc tgtttggtagattccgtttgcccgctcgctgtttccatccgattctgccg tggctgcttgctcgtttttcttagaatcgatgggggagctggcgttccgc gcggccgcgatttcttgctatggggggtagggcgcgcgatgggtcgccgg gctattttatgctccgccagcgccgggaaggttgttcatctggcgtattt tggggaaattttggtcccggacgcgccaggtggcaccccaagtggaaggg ttaagacggtaatctcttgatatttctatcgggctggggttatttacgta aaaaatatatatggggttaaagtgacatcgcaatttagcatgctacctca tcttctcatttggaatcttaactagacgctacaataccttgttgtctccc tcatcaaatctgtgcttgctgcttgaacaaatgaacctcgtcatctcggt tatttccagaattttgttccacaggctttgctatcattcatattggtagc tccggccatgcggccattttgttgcttgcttggagatactgtctacggca cgcacggagaaaagagtcacttgaccagctaatgcatggaattattgtct gcagctgatgaaactccggcatgaagagtcaaaccaaaaagtagagagtt ccttccaaatataaaataagagtttctgcatactttttttccctttcaac catcatagtttgcccgtgatatttgttggtgctggcgatggttcttcaca aagtaaaggagtcaataaaatcacggagactgatccattatttcccccac acgctgacattagtccatgttagtttcccatttctgtctgcttccataat tcccgtccggcgaagtactagatcagcctccacggtttgaaagtaagaaa tatcataccgtcgaaaggatcgctactgcttagtaaatatccattgttgt ttgtaatcttgctgagaaagcaacattaccatcagcttcatggcaaggac ctgtatgttgaggtgctaaatctcttctagttttgtaccactgagggtat gcgcggcgctaacggaaaagggtaagtaaagttttattggcttgccttca gcttccttggttgtttgacgcataggtgcttgcatgcatgtatcaagctg gtcacgtgatgaaaacgcgtaagaatcaaagtcggttaaattaagatata aatagatgcagtcatattttaagctagtgctgcactgtgaacttcagtat ctcagatcaaagtactgaataaaattaccccctgtttccgtgctgttcat ttggaaaagactgccatgaacatccgaattggtaaccatgcattaatcag cttgccggctttattttcttctctgtcgttccttgtcatttggtttgctt tgcctacctctgcacgataggcacgtgtaagtagctcacggggacaagta actgctatgctttgtctagagcctatgagacagcacgctgatgcaccacg atattccatggtttaggatcggaactaaaatcttgagatcttacaatatt ctaaaaaggcatctatagcctgcatataaccgactcaggcacaaaatcag cattgatcgagcaggcatcatatgcatacactaaaatgcagctaatgatg tagcctgctgattttctggacctggcttggataatggttaatgtacccaa ttgttattcactctatatcctccatctccttatcggtcgattaatttacc acacatagcaaaggtccaaagctgacattgcaaccaactttactcatctc tagactagtaaacacgaagtaagctgttagggactgtgtgatgggtctat gttacatgcatttgttgtcggtctagtacttaaccaagtctgggaaccag ttatcctctacacctattgtgtccctaaacctatatacttgagagtaaaa cagaagttattcctaggaatatctgactaagctatgggatagtcaacttc catttttgctcctgccacatctttacttagtccacaaacgacatatagat gatcagctagaaccgttatttagagtttatatctgctcattacatgtatt aattccatgaaatagaagaaaaactgaataggcacacaatatagttgaag ctcggcagatgacttcataagtgtcatatctattaaccatttcacatatt gttacatttttgctgcagtgatattttgttagctcccagttacaagttaa ctaatatatggagatcctgggcacgtacatgtaagcagatcctatcgact ttcgtggatccgctgatggaatcacacctcaggatttcatggcatagtct tgatatgtcacgaactggttgttactttatttatttattttacactgtgt tcgcccacccagatgacagaaatgttatgtatttaaaatgtaatctcaca gtcattgttgttggtatggaccgtatgccaaaaagggttttaccatgaag tctattaatgaataattatttatgttacaacttgattgctttacattagt taaaattagttattttgtacctttgtgccccccttcttgttcaaccattt atcttaccaaactatgcatcaacaaacatgcacagtcactattcataaat ttcatattctcaaaatttaaatattaagaacaaaagttatgtttctactt tttccaactaacaattctctgaactcaaattttataatttgaaattttaa tattaacattttattttaaaactttttgaatttcttttttattataaaaa agtttggatggcataaatttatgtatgaactattatgaaaccacaagcaa taacgaaagtgtgtttttaagcaaaaccttatgacccatcactcaaatag tttgcgtttgattttcaaattgacgcgcattaaagacatatacatgcagt cttcatatcacatgtgtgcttttcctgcttaaggtagtaggactatctct tttttgataaacaccgattacaacgtagatgcacacacaagtgcacatta ccaccacacgtacacactcacacaatgtttagtaaggactaaaattgtgg agcttcaagatctctggaacgtcaggaatgtcgcctcccacggaacgaat aatccgcacagtgtgtcaaaccattggttcgatcttccttggtgggctgt gagtcaaggtactaaaaaagcggtaggcgctaatctgaattttgcctatg cctagtgcaatgaccgcctaggcgcacttatgccttcgtatgacaaagaa ggagattttacaacaatgaaatcaatggtgcggagcctagagggaggtat cggtggtgagttggagtgagaaatccctcctctgattcaacctttcttga caacatagcccaaacaagaccgtccattttctttgcatcccccttttccc gtctctttgtatcgttaggtctctttcattcgtcatttgtatgtagcgat aatggtggtgtctgcagcttcttccctgcattcgcttctcctttcctacc gtcgccggaaaaagatctcatcggtcatggagaacatagtcgggcgccta aaccttggcctatggcaaaagtgaggcggtagtctgcttagcgcctaagt ggctccttttcattgtccttttttccatgttgggagtacaaccgcactcc taacccactaaccatagattggttatcatctagtactttctgtaccactt ttatcttacaaacgcgagggtattgtggtggagagccatgtattacaact ttgataatcaaaattcaaaattcaagtctctgaagatcctttgaaaaatg tgttttgtcaagggcaaaaaatatatctttgtttgccataccaagatact ccctccgtaaagaaatataagagcgtttaggtcactacttgagtgatctg aacgctcttatatttgtttaccagggagtacaaaagaccatattcttgca ctaatttttactagtggttatgcccgggcatatgagggtcgggaaggaag gcgcaagggacatctagtaaaaattagtgagagaataaccgcaagggaca ttgtgcactaatgtttaccagggagtacaaaagaccacattgtgcccggg catatgagggtcgggaaggaaggcgcaagggacatctataagatggctaa gatcgtgaggaaggcgagggatgtcaaacaagtcaaatgcatcaaggata gagcagatcaactcctggtgaaggacaaggagatcaagcatagatgacag gagtactccgacaagctattcaatggagagatgaatctaggggtctgaga ttagggaggctttacaaagaataatgttataggagtcattgggcaccact taagagtaatggcaagcgtgaccaaaaatcagtttgttttcatgcctgag aggttgatcatggaagtcattttcttggtatgaaaacttatggagaaata cagggagcaaaaagaagacttgcatatgatgttcattgacttgaaaaagt cctgcaataagatactgcaaaatgtcatgtggtggtccttggagaaacac aaagtcccaataaagtacattactctcatcaaggacatgtacgatgatct catgacaagtgttcaaaaaagtgatggcgacactgatgaccttccgcata aaataggacagcaccaagggtcaacttcgaccccttatctttttgccttg atgatggatgaggtcacaagggatatgcaaggagatattccatggtgtat tctctttacgattgatgtggtgctagtcaatgatagtagctcgaggcata atggaaagttagagctatggagacaaactttggatcaaagtttttaggct tagtagaactaaaattgagtacatgaggtgcggtttcagtactacttggc acgaggaggttagcctcaatgggtaggtggtacctcagaagggcaccttt tgatatttgggatcagtgttggaaaaggatgccgatattgatgaagatgt gagccattaaatcaaagtcggatggaggaaatgatgccaagtttctggtg ttctctcttgacaagatagtgccacgaaagctaaaagacaggttcgatag gacggcgccccgcaatgtatggcgctgagtattggccgactaaaatgaga catattcaacaattgggtgtagcagaaatgcgcatcttgagatggatgtg tggtcacccaagaaaggatcgagtccaaaatgatgatatacatgtagagt cggggtagcaccgattgaagggaagcttgtcgaacatcgtctgagatggc ttggatatatacaaagtaggcctttagaaactttcgtgcatagcaggcgg ttaatacatgctaataatgtaagagaggttgggctagaccaaacttgaca tggaaggagtccgtgaagagagatctgaagcactaaagtatcacacggaa ctagtcatggacaggggtgtgtggaagttagctatccacacgccagaacc attacttggttttgagatcttatggagttcagctctaccctatccaactt atttgggactaaacgctttgttgttgtatctcttgccttggtcttagcaa cttaccatgtgcatgtcttttctcaaaaaggaaaattgaatgccaagtat ttcctgaagttgtacattgtacaatttgatgtccttgctccacggtacat cagatttcccatctcatgatgatgcaacaactaggtcttagagcaactct agcagagtcttcatggcttccgtcgctatatttcttttatctcgctccat acacaggtctcgtggcctccatatttggaggttggagaggtccagtaagg agctcgccccaaaaccaaccgctaaagttttaagcttcctcctcgcgcct cctgtcggatttgaagcaacccgcgccctcggattcctatggcggtccat tggatgaccgccatgcggcatcatcttcttgcttgcatgtgagcagactg gaggtgtgcgagtaggtcgctgcagcatttctcatagggaggcgcgccct tcgactacccgccattagctgccacccgcgtccccaagtgcctccctaat ggcgcctgcggtggcctgtaaaaggccggcgccctccgctctctagcttc aatgctatcttcgacgcctcttattccaatctcacacgcctccaatccac catcccctttgtcgtccacagcgcatccagaggagctccctctcgccttc aatttttggcataaggtggaggagtagcccgcggatcctttgcccccctt tagggaccagacggacctagtcctggaggggggctgcgcagagcaacttg tagcacccaagattctatcccgatcacgtgatgaattcatgatcggagca gaatcgcatttcgagcgcatagcgagctggatatcattacaacataccat gcactaaatagatgagaataccagataaaggtttacactcgccacaagct acaacatgaatacatcaatacacaacaatcatcatacaggagagcaggat ccgactatggatgaaatcaaacaaaaagaagaacgacatctaccctgcta atcccgggctcctgaactggaacccatcctatgatcgacgaagaagcaga agaagaactccaaaagcaaacatgcatcgctctcacgtcaagcatttctt tatctatacctgcacctgttgtagtaatctatgagccatggggaccagca atctcattaccaagggtagcaaaactagcaaagattaatgggtatggaag ggttaagtggtgaggaggctggaagcattaagcatttgtatggtggctaa cttacgagtacaagagtaagaagagtaaactacacatagcggtcgcaaac tattaatgatcaagaagtgatcctgaactacttatgagtcagtcataacc ccaccgtgttcacttcccgaactccttggaaaagagacgatcatgtaacg cacgcggttggtgtattttaattgggttcagtgtcaagttctctaaaatc ggatattataaatttttaagtcgccacataaccgcgggcacggcttccga aaagatttagccctgcaggggtgcaccaagtagtccattataaattacca catgcatccgatggaacatcctcacaccatgataacacgatgcttacaat aaggaaccccggtggacaagccattcgtcaaaggcaaaactaaaccagca agaccacccggtgtgtcgtcaccccgataagagccgcgcctattttctag ggttgcctaacccttgggatcccttggaccaccttactatgtgcatgttt tcttttcacacgggcatttatctgctttggcatcaaagctttcatttgaa aatttgctactaccacctatatttgtactgacaatacctttgcatggacc cacacattaggttttaaaatggttctcacattcgtgttgtcttacttatc taggcatggctcttgcccagataattgttgttggtcacacccttctatat tatcggtttgtgagtctagctgattggatacgtgagttgttgcacactct tgaactgattttgacttgatgaccattgtaaccatttgcgggttataggc tagcacatagttcaacactataactaattgttggttcattcctactatag gttatagggtagcgtttgacaattttccatgtgttgtgggtacttgtgac aattgaggacacgatgtttgtggtgacagagaacacgttgacctccacaa atagttaggatgctgggtaaagcctacgggaaaacagggagaaggtatag gaggagaataacatgagtagtaaaaaagttaatgacttaaatacaacatc aaggaacgtttcttaaactgaagctctagcactatagttaaataatttga atctggcagaaattatactaaccttgcctagcacaattccacccctaaac ttctgttttgcaaatttcgttaagtctatagacagaagaaaagggtcact ctattttcccaacaaaacttgaacaacaccagaaccttaatttgaagtca gtttcgtgctctttctatcatttacacgtcacagtgaaatgctttgcaaa ctatttgaccagatgctgtataccacatttgaatctcatttgcatatact gacatgaaacaacgcattacagaaaagcttctgatatgtcaaaatgtatc atatatcaattcttgagattgtgcatatactggacattaatcttgtttac atgtacttccaatgactagatatttctttctcttatgcagtatggacaaa attcttgaacggtatgagcgctattcttatgcagaaaaggttctcgtttc aagtgaatctgaaattcaggtaaaaatgaaaaacaagcggtttgctttcc tttagctatgaaataaattgttgccgatatcagatgttctgaaatttatt tgtaggccactatattttgaatgatttccatgcgctatgaagttaattga cttgcaactatggattgttggtctatttgattctcttgtaacctattatc agtttttcttcgatgaatgcttaggcatggtcgaataatgtaaccaaata ccacttgaccaatttactttcatggctactgaactagactagcatgctga ttcgtacatactgcctttggaagaactacaaaaatgtgatctgactttaa gagttactaaattagtacgtagtaaactgcaatgcatggccagatcagca attctggattagccggctgagtttttgaagggcttagcaacaaaaattga caagcttatatattataatggctttaaaatacttgtgtgcatcagtgaaa atcacaatattttgattgcaataacaaaatgctatcctagattattaaga cttgttactagattggtcattgatcttaagttcttaggataaactgttga atctccagtccttcggattgtattatgctactaatggccattaaggatag ccccatgacattagttctcatctccaatttttctgtattgtttgcgatat tgctgcagtttcttattacagcttgtctaaggctaaccatctaggataaa aagtagatcctgcagacttagaagatccagttaggctcaatattcttatt tttgtaactcggaactccaggacctcgcttcaattttttggccaattttt gcacaaaccaagttgtagctccaactgagggatccaaccagttctatctg attgctgacaaacagattcagcatgtacgtatgacgaggactatttaaac atgtaattactaacccaaaaaatattccaaattttatttaaatatttacc tccgctgcagcatttttaatattacgaaatatgatttttacatctgatag taacacttgttgcagtgacataattgatttgaagttatgaaaattcaagt tcactgcacagaacaatccttcctgatttatgcccccggggtaaaggagg agggttgtgataggcttggcgagccaacgtaaaaactcagccactcttat ggagatgaaacccaaaagccaaagagctagctatggacaggggtgcgtgg aagcttgctatccatgtgccagagccatgagttggttgcgagatcttatg ggtttcacctctagcctaccccaacttgtttgggactaaaggctttgttg ttgttgttgttggtggtggtgtcaatgttgttaaagtctctttgttcatt tctgaactaacttagcctatttgtagcatttctgtcattgttccttcctg tcccacccaaagttagtaatgcgattgttatttgtttgtgcagggaaact ggtgtcacgaatataggaaactgaaggcgaaggttgagacaatacagaaa tgtcaaaagtaatttgtaacgattttggttgattgccagtatattgtata cactctgaagataaatgggactgaatttctacatcctgcatctgcaggca tctcatgggagaggatcttgaatctttgaatctcaaggagttgcagcaac tggagcagcagctggaaagctcactgaaacatatcagatccaggaaggta ctgatttaaatgatttgatacagcagcacaatatataaaaagaagaaaaa cacttgcagagaagttcagcaaagtatatctgaaatcagattctagactg agatgttcaaaatatgtatatgcattttagtcatatgctcttcatagtta aaaaaatgactaatttttttcattttttgtacttgcagaaccaacttatg cacgaatccatttctgagcttcagaagaaggtaagctgtcaaccttgcat accttattcggtattcgaactggtcaacttgtcatgaagccttagcttgt ttcaagatttgtgacattataacatgtatgcaagtaactggtctacatgc acgtaacctcattacatcgttcttgctgcaggagaggtcactgcaggagg agaataaagttctccagaaggaagtaagcccgttatatcaccttatggtc caaccggtctaaattgttccgtatagcaaattttattgacagaggtccgt gtcccttccccacagctcgtggagaagcagaaggcccatgcggcgcagca agatcaaactcagcctcaaaccagctcttcatcttcttccttcatgctga gggatgctccccctgccgcaaataccaggtgatgatgtacatcacaagtc taatcttattcagagttcaagtaaccatcttttgaattggtcgggttgtt ccttgcagcccacttttggtctctatgcagttctgtcgggccacatttaa gtaacataatactaatatgcttgtgttcgctttggttgtgcagcattcat ccagcggcaacaggcgagagggcagaggatgcggcagtgcagccgcaggc cccaccccggacggggcttccaccgtggatggtgagccacatcaacgggt gaagggcatccagcccatacaggcgtactattcagtagagggtaacaagt tgcaccggccagcctggtgtatgttgcggttgctagcacgcctgacccct ttggaggggaaaggaaaagaaatcagagtaaagtagcaagctgcagcgat gtgtatatttcactttgtccacctcagtttccctcccagctgggctgaga tggctgtacgagtaatttaccatgtaatctatatgtagcttgagtgatga attttcaagtttccatgatacccgtctctactgggtgttgtttatgtgaa ttaacctatcaaat

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