GrainGenes Sequence Report: NM_117934_1.cds
Sequence
NM_117934_1.cds
Peptide
MTTKLSSFCFLTHGLAGISCEREHGSSRRFFYLPSRRLVSTSCKMRQQRG
FDSSKRQEVKKGSPKPILSINSGLQSNNDEESDLENGSADSVPSLKSDAE
KGSSIHGSIDMNHADENLEKKDDIQTTEVTRRKSKTAKKKGESIHATIDI
GHDDGKNLDNITVPEVAKALSLNKSEGEQISDGQFGELMTMIRSAEKNIL
RLDEARATALDDLNKILSDKEALQGEINVLEMKLSETDERIKTAAQEKAH
VELLEEQLEKLRHEMISPIESDGYVLALSKELETLKLENLSLRNDIEMLK
SELDSVKDTGERVVVLEKECSGLESSVKDLESKLSVSQEDVSQLSTLKIE
CTDLWAKVETLQLLLDRATKQAEQAVIVLQQNQDLRNKVDKIEESLKEAN
VYKESSEKIQQYNELMQHKVTLLEERLEKSDAEIFSYVQLYQESIKEFQE
TLESLKEESKKKSRDEPVDDMPWDYWSRLLLTVDGWLLEKKIASNDADLL
RDMVWKKDRRIHDTYIDVKDKNERDAISAFLKLVSSPTSSGLYVVHIAAE
MAPVAKVGGLGDVVAGLGKALQRKGHLVEIILPKYDCMQYDRVRDLRALD
TVVESYFDGKLYKNKIWIGTVEGLPVHFIEPQHPSKFFWRGQFYGEQDDF
RRFSYFSRAALELLLQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGLDSA
RICFTCHNFEYQGTASASELGSCGLDVNQLNRPDRMQDHSSGDRVNPVKG
AIIFSNIVTTVSPTYAQEVRTAEGGKGLHSTLNFHSKKFIGILNGIDTDS
WNPATDPFLKAQFNAKDLQGKEENKHALRKQLGLSSAESRRPLVGCITRL
VPQKGVHLIRHAIYRTLELGGQFVLLGSSPVPHIQREFEGIEQQFKSHDH
VRLLLKYDEALSHTIYAASDLFIIPSIFEPCGLTQMIAMRYGSIPIARKT
GGLNDSVFDIDDDTIPTQFQNGFTFQTADEQGFNYALERAFNHYKKDEEK
WMRLVEKVMSIDFSWGSSATQYEELYTRSVSRARAVPNRT
Structure From Source
NM_117934
Source Exons
1 3123
Corresponding Protein
NM_117934_1.protseq
Gene
ATSS4/SSIV
Gene Product
ATSS4/SSIV (STARCH SYNTHASE 4); transferase, transferring glycosyl groups
Remark
CDS note: similar to ATSS3 (STARCH SYNTHASE 3), starch synthase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G11720.1); similar to starch synthase IV [Triticum aestivum] (GB:ABD64538.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66915.1); similar to starch synthase, isoform V [Vigna unguiculata] (GB:CAB40375.1); contains InterPro domain Starch synthase catalytic region (InterPro:IPR013534); contains InterPro domain Glycogen/starch synthases, ADP-glucose type; (InterPro:IPR011835); contains InterPro domain Glycosyl transferase, group 1; (InterPro:IPR001296) DB_xref: GI:42566924 DB_xref: GeneID:827550 DB_xref: TAIR:AT4G18240 Feature: CDS: locus_tag = 'AT4G18240'; protein_id = 'NP_193558.3';
Codon Start
1
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: NM_117934_1.cds
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||