Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: NM_180299

Sequence	NM_180299
Subsequence	NM_180299_1.cds 61 3390
External Databases	Data at GenBank Data at EMBL Data at DDBJ
DB Remark	Locus Source: Arabidopsis thaliana (thale cress)
Species	Arabidopsis thaliana
Chromosome	3
Data Source	genbank Downloaded 2008-2009
Title	Arabidopsis thaliana MSH7 (MUTS HOMOLOG 6-2); ATP binding / damaged DNA binding (MSH7) mRNA, complete cds.
Gene	MSH7
Remark	DB_xref: taxon:3702 Feature: gene: locus_tag = 'AT3G24495'; synonym = 'MSH6-2, MUTS HOMOLOG 6-2'; function = 'encodes a DNA mismatch repair homolog of human MutS gene, MSH6. There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2*MSH7 exhibit moderate affinity for a (T/G) substrate and weak binding of (+T), suggesting MSH2*MSH7 may be specialized for lesions/base mispairs not tested or for (T/G) mispairs in special contexts.'; db_xref = 'GeneID:822040'; db_xref = 'TAIR:AT3G24495' Feature: source: mol_type = 'mRNA'; ecotype = 'Columbia' Locus Comment: PROVISIONAL REFSEQ: This record has not yet been subject to final; NCBI review. The reference sequence was derived from AT3G24495.1.
EMBL Feature	feature_gene 1 3465 Location: 1..3465
DNA	ttcgaattctctcagctcaaaacatcgtttctctctcactctctctcaca attccaaaaaatgcagcgccagagatcgattttgtctttcttccaaaaac ccacggcggcgactacgaagggtttggtttccggcgatgctgctagcggc gggggcggcagcggaggaccacgatttaatgtgaaggaaggggatgctaa aggcgacgcttctgtacgttttgctgtttcgaaatctgtcgatgaggtta gaggaacggatactccaccggagaaggttccgcgtcgtgtcctgccgtct ggatttaagccggctgaatccgccggtgatgcttcgtccctgttctccaa tattatgcataagtttgtaaaagtcgatgatcgagattgttctggagaga ggagccgagaagatgttgttccgctgaatgattcatctctatgtatgaag gctaatgatgttattcctcaatttcgttccaataatggtaaaactcaaga aagaaaccatgcttttagtttcagtgggagagctgaacttagatcagtag aagatataggagtagatggcgatgttcctggtccagaaacaccagggatg cgtccacgtgcttctcgcttgaagcgagttctggaggatgaaatgacttt taaggaggataaggttcctgtattggactctaacaaaaggctgaaaatgc tccaggatccggtttgtggagagaagaaagaagtaaacgaaggaaccaaa tttgaatggcttgagtcttctcgaatcagggatgccaatagaagacgtcc tgatgatcccctttacgatagaaagaccttacacataccacctgatgttt tcaagaaaatgtctgcatcacaaaagcaatattggagtgttaagagtgaa tatatggacattgtgcttttctttaaagtggggaaattttatgagctgta tgagctagatgcggaattaggtcacaaggagcttgactggaagatgacca tgagtggtgtgggaaaatgcagacaggttggtatctctgaaagtgggata gatgaggcagtgcaaaagctattagctcgtggatataaagttggacgaat cgagcagctagaaacatctgaccaagcaaaagccagaggtgctaatacta taattccaaggaagctagttcaggtattaactccatcaacagcaagcgag ggaaacatcgggcctgatgccgtccatcttcttgctataaaagagatcaa aatggagctacaaaagtgttcaactgtgtatggatttgcttttgttgact gtgctgccttgaggttttgggttgggtccatcagcgatgatgcatcatgt gctgctcttggagcgttattgatgcaggtttctccaaaggaagtgttata tgacagtaaagggctatcaagagaagcacaaaaggctctaaggaaatata cgttgacagggtctacggcggtacagttggctccagtaccacaagtaatg ggggatacagatgctgctggagttagaaatataatagaatctaacggata ctttaaaggttcttctgaatcatggaactgtgctgttgatggtctaaatg aatgtgatgttgcccttagtgctcttggagagctaattaatcatctgtct aggctaaagctagaagatgtacttaagcatggggatatttttccatacca agtttacaggggttgtctcagaattgatggccagacgatggtaaatcttg agatatttaacaatagctgtgatggtggtccttcagggaccttgtacaaa tatcttgataactgtgttagtccaactggtaagcgactcttaaggaattg gatctgccatccactcaaagatgtagaaagcatcaataaacggcttgatg tagttgaagaattcacggcaaactcagaaagtatgcaaatcactggccag tatctccacaaacttccagacttagaaagactgctcggacgcatcaagtc tagcgttcgatcatcagcctctgtgttgcctgctcttctggggaaaaaag tgctgaaacaacgagttaaagcatttgggcaaattgtgaaagggttcaga agtggaattgatctgttgttggctctacagaaggaatcaaatatgatgag tttgctttataaactctgtaaacttcctatattagtaggaaaaagcgggc tagagttatttctttctcaattcgaagcagccatagatagcgactttcca aattatcagaaccaagatgtgacagatgaaaacgctgaaactctcacaat acttatcgaactttttatcgaaagagcaactcaatggtctgaggtcattc acaccataagctgcctagatgtcctgagatcttttgcaatcgcagcaagt ctctctgctggaagcatggccaggcctgttatttttcccgaatcagaagc tacagatcagaatcagaaaacaaaagggccaatacttaaaatccaaggac tatggcatccatttgcagttgcagccgatggtcaattgcctgttccgaat gatatactccttggcgaggctagaagaagcagtggcagcattcatcctcg gtcattgttactgacgggaccaaacatgggcggaaaatcaactcttcttc gtgcaacatgtctggccgttatctttgcccaacttggctgctacgtgccg tgtgagtcttgcgaaatctccctcgtggatactatcttcacaaggcttgg cgcatctgatagaatcatgacaggagagagtacctttttggtagaatgca ctgagacagcgtcagttcttcagaatgcaactcaggattcactagtaatc cttgacgaactgggcagaggaactagtactttcgatggatacgccattgc atactcggtttttcgtcacctggtagagaaagttcaatgtcggatgctct ttgcaacacattaccaccctctcaccaaggaattcgcgtctcacccacgt gtcacctcgaaacacatggcttgcgcattcaaatcaagatctgattatca accacgtggttgtgatcaagacctagtgttcttgtaccgtttaaccgagg gagcttgtcctgagagctacggacttcaagtggcactcatggctggaata ccaaaccaagtggttgaaacagcatcaggtgctgctcaagccatgaagag atcaattggggaaaacttcaagtcaagtgagctaagatctgagttctcaa gtctgcatgaagactggctcaagtcattggtgggtatttctcgagtcgcc cacaacaatgcccccattggcgaagatgactacgacactttgttttgctt atggcatgagatcaaatcctcttactgtgttcccaaataaatggctatga cataacactatctgaagctcgttaagtcttttgcttctctgatgtttatt cctcttaaaaaatgc

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.