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GrainGenes Sequence Report: U76261

Sequence	U76261
Subsequence	U76261_1.cds 3604 4617
External Databases	Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index	TC189722
Data at Gramene	Gramene-Protein Q96467
DB Remark	Locus Source: Hordeum vulgare
Species	Hordeum vulgare
Developmental Stage	seedling
Data Source	genbank Release 135, Apr 15 2003
Title	Hordeum vulgare highly repeated, retrotransposon-like sequence.
Strain	Waxy
Clone	pBRS1
Remark	DB_xref: taxon:4513 Feature: repeat_region: rpt_unit = 2200..2216; rpt_unit = 2269..2285 Feature: repeat_region: rpt_type = direct Feature: source: mol_type = 'genomic DNA';
EMBL Feature	misc_feature 2670 3064 similar to a region of Triticum aestivum alpha gliadin gene (GenBank Acession Number U08287) Location: 2670..3064 repeat_region 2200 2623 region consists of 11 direct and 7 inverted repeat subunits; 6 direct and 3 inverted subunits create 3 repeat units, which consist of terminal direct and internal inverted subunits Location: 2200..2623 repeat_region 2344 2401 repeat unit consists of two terminal direct and one internal inverted repeat subunits Location: 2344..2401
DNA	gaattcagaagagggatggttcgcataactcaatatggacgtgcaccttt gttaggataatataaatgttcatctagttctctatagcattgcatctcaa actttcaagaatgcacgtgagatcattttgtcgttttacctttgtagtgg caattcgatggtgctaagatttataaggcacctttgggatggtggcaaat catagcttttaaattagcctcatatttaaacaattcagaatcagatggaa gactacttgactcagactttcaacgacgcactatattgatgaatgatgtg cacttgtttatcttgttcttctaggcgacctggtgagatgcataacgggt ggtggtgtcttttgcggatgctgatgcatggtgactcaagctctatgttc tttgaagattgaaatccttatgtcctacttgttgtggttatgttgagagc ttcatgtttatctgaatgtgtcttttgtgtgtgcagtattctggaatttg tgacctacttgaaccttagttgtcgattgcttgtcatttaatatggttaa tggtcaggttatacatcatgttaattcgaagttgacactaatatgcctag tcttatttccttgtagctgctggtttggtgcattttggattgcccggttg gtactaatatgcctagtcttattgctgctagctatttcttctttaagatt tgctttgccaacgatctgcatggatcttgtggttattttgtcggctgctt tgctgatgccttccatcctcagccttgctaatcaatggagcaacaggctg agcctgagtcttgtattgtgtagcacactatcaagcagagctagtctgtt tcaactcaaatctacccttcggtgagtgtgtcctccgaatatggtgcacc tacgaatgttgaatgcaatgattttacaatgcagttcatatgataggtat gtttgttggcttatcgcaatgatctcaatatcatgatctaagtattcttt tcgaaagtgttcagttcagtaactttatagaacatttagttgcatgggtc aacggcaggagcctgaaatgcctcgttgaccatccttgatgtatatctac ttatgtactcactccgtctcaaaataagtgacccaaaaatgactcagctt tgtattaattttgggatggagggagtactataacactaaaaaggtataga gtaacattgttagtttgctacagattatctttactagttcgagaaaaatg gagtttaaatttgttgtggcttggtgaacacaactttgtaaagaaacaaa tgtgctcagacatatagtagataattcaatacagagaagtgtgtacttat agtgtgaacaaagaagtccataattcacttaatacttcagagagaaaatg tgtagttatagtagatagcaacagacatatagcgggtaacctatactagt tgaaattcaaatcgtagtgaaccaacagagcaaccgctgctagtagtgcg tgtctgtggctgacctggaggcaccttggtttttcagttctccttaattg ttatttgattttcagaattttacatgtattttacatgttgatcttacagg accatgtcagtgtcttctagagattaaattcatgtttagttaatgcttgt gttgctgcttagatggtgcaacattgaaagtatcatggtacaatctattc atgtttagttaatgcttgtgatggacagaatggcctgttgaggaacagtg cagttcctgttgaggatagtgttgttgttgcaagtagcatggtccttaca caacctgaggtagaaggcaaggaagatttgcaacagacaagtagtgatga taattctgtgagtcaaaagctttctgatggacagagtacaaagggtacac cacaagggaggaggcggaagttagatatcgacttgtaatgtgatggtagt ttagatgatcgatatcgacttgtaatgtgaagacaaactcgctactcgcg gtctcgagacttgtaatgttctaactttgttcggtattttaaattcagag actaatatgatgaattgtattcggagactaatcttctattctactcgata aatctgttgtttatatgttgtgctctctatattctgtgcaataatatgtt ttgtaatctgtgcaaatatcagaaaaaataaaataaatacctaatattca tactagtggcgcaccactgagcagtttagtggcgcacttcaaaagcacac tagtggcgcatcgtcaactagtgcgccattagtaagccagagcacatggg taaatatggccctgggaggcatactaatggcgcaccataagctatattaa tggcgcaccaggaggtgctccattagtataccagatactaatggcgcacc aggagctatactaatggcgcacttcttggtgccgcattagtatactagat actaatggcgcaccgtgagcaatactaatggcgcactgcctggtgcgcca ttagtataccagatactaatggcgcacttgtggtgcgccattagtaaaaa aatataatggcatgatgctagtggcgcacctacagtgcgtcattagtagc caaaataggtgcgtcattagcaagccttttcctagtagtgtatgattctt gcaatgggataagtgctttgttttgggttcataccgtgaagtgacctcac ccagtgacagaaggaatagcgaggcacgcatcatgttgttgccatcaggg gtaaaaagatggggttttcatcattggtttgagattatccctctacatca tgtcatctttcttaaagcgttactctgttcgtcatgaactcaatacacta gatgcatgctggatagcggtcgatgtgtggagtaatagtagtagatgtag aaagtatcggtctacttgtctcggacgtgatgcctatatgtatgatcatt gccttagatatcgtcatgactttgcgcagttctatcaattgctcgacagt aatttgttcacccaccgtgatacttgctattttgagagaagcctgtagtg aacactatggacccgagggtctactacacaccatattttcagccttacac tttttacttcgttgcactttccgccttcagatctcactttacaaacaatc ttgaagggattgaaaacccctttgaagcgttgggtgcaagcttgtttgtg tttgcgcaggtactctggactcgacgagaccctccttctggatcgatacc ttgcttctcaaactcagggaaatacttactgctcccgtgctgcatcaccc tttcctcttctagggaaaaaccaatgcaagcccagcctctgtcaacgtgt caatttctggcgctgttgtctgtgggatagcagaaggatttctcgcgccg ttgccggggaggaagatcaagtcaagaactcatccaagtaggtgtcgcaa actcatctcttgcatttactttgtttgcgagttgcctctcgttttcctct cccccacttcaccaatttgccttttttcattcgccttttcgttcgccctt tttctcgtctgctctttgtttgcttgtgtgcttgcttgcttgctgaagtc accatgaatgaaaacaccaaactttgtgacttctcgaatactaataataa tgattttattagtactccgattgctcccgccactaatgcggagtcatacg aaatcaatgccgctttgctgaatcttgttatgaaagagcaattctctggc cttcctagtgaagatgtcgcatcccatctcaataccttcattgagctttg cgatatgcaaaagaaaaaagatgtggataatgacgtgattaaattgaagc tttttcctttctcgttgcgagaccgcgcaaaaacttggttttcttctttg cccaaaagtagtattgattcttgggataagtgcaaagatgcttatatatc caagtattttccgccggctaagatcatctctctccgtaatgatatcatga atttcaagcaacttgatcatgaacatgttgcacaagcttgggagagaatg aaattaatgattagaaattgtcccgctaatggcttgagtctttggatgat tattcaaatcttttacgctggcttgaatttcgcttctagaaatatcttgg actccgccacaggtggaacgttcatggaaatcacattaggggaagccaca aagctcttagacaacatcatgacaaactactctcaatggcacactgaaag gtcacctactagtaagaaggtacacgttatagaagaaattaactcgttga gttctaagatggacgagttaatgaatttggttgctagtagaagtgctcct ttggatcctaatgatatgcctttgtcttctttgattgagagtagcaacgc tagcttggaagttaattttgttggtaggaataattttggcaacaacaatg cctttagaggaaactatgttcctaggccttttcctagtaactcctctaat aactttggcaactcctacaacaatactcatggaaattacaatagattacc ctctgatctagagagtaatatcaaaaagagttcatcaacgctcaaaagat tttcaatgcgtccatagaggaaaaactactcaaaattgacgatttggcta agagcatggatataatttcttgtgatgttgatgctttgaaagttagatgt gctcctcccaaaatcaacatggatgaaactttgaaagctatgcgtgtttc catgatagagagccaagaaagaactgccgaaattcgtgctagacatgaat ggcttaaaaaggcgtgttctcgtgatgagaatcacgaagatcttaaagtg cttggtgtgaatcccattgaatctttgttttcttgtgtcaaacccaatga ttatggggctatatatgaatccactttggttgaaaagtgccccaatgatt cggagtccatctatcttgatgctaaaagcattaaagtggagtagaagact ttaaaactttgagtagtaatgaaattactacagtggatttcaaggaattc

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