GrainGenes Sequence Report: X05995

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Sequence

X05995

External Databases

Data at GenBank

Data at EMBL

Data at DDBJ

DB Remark

Locus Source: Triticum aestivum (bread wheat)

Keyword

Glu-Aly gene

glutenin

insertion sequence

retrotransposon

Wis-2 insertion sequence

Species

Triticum aestivum

Chromosome

chromosome 1a

Data Source

genbank

Release 135, Apr 15 2003

Title

Wheat Glu-Aly sublocus with Wis-2 insertion 5' end (0.8 kb Hind III fragment).

Strain

Chinese spring

Remark

DB_xref: taxon:4565

Feature: intron: note = 'insertion sequence'

Feature: source: mol_type = 'genomic DNA';

Locus Comment: Sequence comparision with Cheyenne; Glu-Aly sublocus gene has shown that the coding sequence of the; Chinese Spring sublocus gene is interrupted by a 8.0 kb insertion; sequence. A DNA duplication and inverted terminal sequences are; flanking the insertion sequence. See also x05996.; Data kindly reviewed (18-Apr-1988) by Flavell R.B.

EMBL Feature

misc_feature	1	482	glutenin homologous seq. (161 AA; includ. stop codon) (1 is 2nd base in codon)	Location: <1..482
misc_feature	478	481	DNA duplication	Location: 478..481
misc_feature	484	493	inverted terminal sequence	Location: 484..493
intron	483	794	Location: 483..>794

DNA

aagcttctccacaacagccaggaaaatggcaagaactaggacaagggcaa
caatggtactatccaacttctctgcagcagccaggacaagggcaacaagg
gtactaccgaacttctctgcagcagccaggacaaaggcaacaagggtact
accgaacttctcggcagcagccaggacaagggcaacagataggacaatgg
caacaagggtactacccaacttctccacagcacccaggacaagggcaaca
accaggacaagtgcaaaaaataggacaagggcaacaaccagaaaaagggc
aacaactaggacaagagcaacaaataggacaagggcaacaaccagaacaa
gggcaacaaccaggacaagggcaacaaccaggacaagggcaacaagggta
ctacccaacttctctgcagcagccaggacaagggcaacaaccaggacaat
gacaacaaccaggacaagggcaacaagggtactgttggaaatatgcccta
gaggcaataataaattgattattattatatttcctngttcatgataatcg
tttattatccatgctagaattgtattgataggaaactcagatacatgtgt
ggatacatagacaacaccatgtccctagtaagcctctagttgactagctc
gttaatcaatagatggttacggtttcctgaccatggacattggatgtcat
tgataacgggatcacatcattaggagaatgatgtgatgaacaagacccaa
tcctaagcctagcacaagatcatgtagttcgtnnnctaaagctt


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