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GrainGenes Sequence Report: Z84540

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Sequence
Z84540
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
DB Remark
Locus Source: Hordeum vulgare
Keyword
BARE-1 retrotransposon
long terminal repeat
Species
Hordeum vulgare
Data Source
genbankRelease 135, Apr 15 2003
Title
H.vulgare BARE-1 long terminal repeat DNA; ID 19RC6DEL.
Remark
DB_xref: taxon:4513
Feature: repeat_region: transposon = 'BARE-1'
Feature: source: mol_type = 'genomic DNA';
EMBL Feature
misc_feature115279matches nt 7245-7412 of BARE-1a (Z17327) internal domainLocation: 115..279
repeat_region280410Location: 280..>410
primer_bind263276plus-strand PBS, polypurine tract (PPT)Location: 263..276
LTR280410matches nt 1-131 of BARE-1 5' LTR, 5' terminusLocation: 280..>410
DNA
agctttgacactattccgaataactatgagtagtgaaacggattcgtata
gtagagtagatatttggagcatttccgaatagcacatagtagcagcatct
ataaaatgacataaaagatttgtaaagaacacacggatctgaaagtttca
aaaccgttgactaaaacgctctctcacgagcaagacgtgatcagacccca
taactatatgggtgttggattcgttggaatcacatggtgatgtgaactag
attacttactctagtgcaagtgggagactscttggaaatatgcccgtaga
ggcaataataaattagttattattatatttctctgttcatgataatcgtt
tattgtccatgctataattttattgattggaaacacagtacatgtgtgga
tacatagacatg

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