GrainGenes Sequence Report: Z84552
Sequence
Z84552
External Databases
Data at GenBank Data at EMBL Data at DDBJ
DB Remark
Locus Source: Hordeum vulgare
Keyword
BARE-1 retrotransposon long terminal repeat
Species
Hordeum vulgare
Data Source
genbank Release 135, Apr 15 2003
Title
H.vulgare BARE-1 long terminal repeat DNA; ID DS5.
Remark
DB_xref: taxon:4513 Feature: repeat_region: transposon = 'BARE-1' Feature: source: mol_type = 'genomic DNA';
EMBL Feature
repeat_region 1 735 Location: 1..735 primer_bind 202 220 PBS region complementary to initiator methionyl tRNA Location: 202..220 5_UTR 201 735 matches nt 2133-2669 of BARE-1a retrotransposon (Z17327) UTL (untranslated leader) Location: 201..735 LTR 1 200 matches nt 120-1828 of BARE-1 5' LTR, 3' terminus Location: <1..>200
DNA
gggacggttcgtgggacggttcgcggggcggatcgagggacgtgaggacg
ttccactacatcaattgcgtttcttaatgcttccttctgtgcgatctaca
agggtacgtagatcggaaatcccctctcgtagatggacatcaccatgata
ggtcttcgcgcgtaagaatttttttgtttcccaggcgacgttccccaaca
gtggcatcatgagctaggttcatgcgtagacattatctcgagtagaacac
aaaagtttttgtgggcggtgatgtgcgatttgcttccctcctttgtcttt
tcttgattccgcagtatgtggatcgaagcggctcggaccgacattacctc
ggtatggcctacgagagactggttcaatcgctacgagcaacccgttgctc
aagatgactggcagtgtcggtttctccaactttagttgaattggatttga
ccgaggaggtccttggagagaggttaaatagcaattcatacatctccgtt
gtggtgtttgcgtaagtaagatgcgatcctactagatacacatggcaacc
acgtaaaacatgcaagaacaattagaggacgtctaacttgtttttgcagg
gtatgcttgtgatgtgatatggccaacgacgtgatatgatatattggatg
tatgagatgatcatgttgtaatagttaatatcgacttgcacgtcgatggt
acggcaaccggcaggagccatagggttgtctttaa
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: Z84552
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||