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GrainGenes Sequence Report: Z84557

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Sequence
Z84557
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
DB Remark
Locus Source: Hordeum vulgare
Keyword
BARE-1 retrotransposon
long terminal repeat
Species
Hordeum vulgare
Data Source
genbankRelease 135, Apr 15 2003
Title
H.vulgare BARE-1 long terminal repeat DNA; ID E1321IR.
Remark
DB_xref: taxon:4513
Feature: repeat_region: transposon = 'BARE-1'
Feature: source: mol_type = 'genomic DNA';
EMBL Feature
misc_feature175245flanking genomic sequence matches H.sapiens HBF-2 mRNA for transcription factor (X74143), nt 340-423 and Rice cDNA, partial sequence (C0834A) (D15562), nt 28-98Location: <175..>245
repeat_region11159Location: <11..159
LTR11159matches nt 1682-1829 of BARE-1 5' LTR, 3' terminusLocation: <11..159
DNA
tctcgctcgcccactacatcaaccgcgtttattaacgcttcctgctgtgc
gatctacaagggtacgtagatccaaatctcctctcgtagatggacatcac
catgataggtcttcgtgtgcgtaggaaattttttgtttcccatgtaacgt
accccaacaggtccctcctcgcatggtggtgctggtgtggtgggtcctgg
cacggggctcacggcgggtggtggtggtgatgttgcgccagatgttgtcg
gtgtcgatcccacctcgggatccagcgacgcacaggtggtttcgttcgcc
ccttgtggcgcgagttcttcctcgggattggcggtatagataggcgtggg
atcttctgcaacaaggcctacatccacgtgtacaagtgctggtacacgac
tgcagccagggaaaattaaacccgtaaactacaaaaatattttgagttgg
actaacctatactacaggagagccctgactgttgaag

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