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GrainGenes Sequence Report: BE422605

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Sequence
BE422605
Contig
NSFT03P2_Contig15615
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC328718
wEST map position
BE422605
NCBI UniGene
Ta.56048
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, moderately similar to NP_563969.1 unknown protein [Arabidopsis thaliana]'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
7BL
7DL
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0055_A08_A15ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0055_A08_A15, mRNA sequence.
Other Name
WHE0055_A08_A15ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0055_A08_A15
Probe
WHE0055_A08_A15
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
Ta.14126.1.S1_at684WHE2AFFY
Ta.14126.1.S1_at222WHE2AFFY
TaAffx.59541.1.S1_at268WHE2AFFY
TaAffx.59541.1.S1_at159WHE2AFFY
Ta.17131.1.S1_at129WHE2AFFY
DNA
cacaaaacaagtcatgtcattattagctagggaccatctgcatcacagat
aagcagaagagctgctcaaatgccataggtttcagcaaccgactgcgaca
atgcttaatgctcaacacaactgaaggtagtcttttacaaccacagatag
tgaagcgcgacacagataggtagatagatagattatcattttctgggcat
tacgtaagggtgggcagactcatttcttcccactcttcttgagaccagat
cctcccagcgcacccttctggcctgccttggccttcagctccttcagggc
cttttgctcatccttcttcttctggaggtatgccaggtcattctcgtcgt
agtccttctcggcgaccttggcctgcttgagcggcttggccttccctcct
tgcttcgacatggcgtacggggccggcggtgaggcgggagggcgggggcg
a

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