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GrainGenes Sequence Report: BE422727

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Sequence
BE422727
Contig
NSFT03P2_Contig12353
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC304045
NCBI UniGene
Ta.50494
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, weakly similar to XP_001633594.1 predicted protein [Nematostella vectensis]'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0058_E08_J16ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0058_E08_J16, mRNA sequence.
Other Name
WHE0058_E08_J16ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0058_E08_J16
Probe
BE422727
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
Ta.24114.18.S1_x_at607WHE2AFFY
[ Show all 69 ]
DNA
ttttttttttttattattattctttcgggttcttacatgatagtgcatgt
caccttatattttcaatggtacaacgaccaaaccatggactaagaacacg
gtgtttcataatctagtactagagttcttctcttctcagttagtaccgaa
gatgccaaatggcacaatggtggtcgagcaatatggagggatgtagacat
tgcacattgctggtagcgtctgcagcgctaggttccttatttcctcgagg
tggggcagatgttgaggttggacaaagccttgggcctatggattttgctg
agatggctggaaggagccctancctgatggatattgttgttgaggctgct
ggtaggagacctggctcgacggttgttgttgttcttcttcttgttgttgt
tgttgatgatgatgatgcagaataatagcatgaacaacattgtggatggc
ttgacaccgcgactgctcggggatctgccacagctgctgacaacataatt
gttgcaacacttggtaactactttgc

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