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GrainGenes Sequence Report: BE422939

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Sequence
BE422939
Contig
Ta.4636.1.S1_a_at
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC342727
wEST map position
BE422939
NCBI UniGene
Ta.4636
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, strongly similar to NP_001048353.1 Os02g0789600 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
6AL
6DL
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0016_B06_B06ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0016_B06_B06, mRNA sequence.
Other Name
WHE0016_B06_B06ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0016_B06_B06
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
Ta.4636.1.S1_a_at1126WHE2AFFY
Ta.4636.1.S1_a_at902WHE2AFFY
Ta.26537.1.A1_at145WHE2AFFY
Ta.26537.1.A1_at125WHE2AFFY
Ta.9286.1.S1_at72WHE2AFFY
DNA
ccatatgttttatcaacaagcaaacacgcaagtctaaaaccgcaagcaaa
taagtacatgactctnacactgaaaagaaccagaaaaaactagacgagtg
accaatctgcatagaggcccgtaacttctaacactacggttcagaatcaa
cgcttgcttgcgatgctgaaggagctaactttcattggggtggcgacaac
caggggagcttcaggggagtcggatcctgcgaagttctcgtgcatgaacc
ggctgtcgacgatggactcttccttgaggacgaccttgtagcagtagcag
ctcttcaggccctcctggtcgcggtagcagtgatggttgctgtccttcac
cttttggaagttccatatgaggctgaacttgccgactgtcgcgacgagat
gcttttcttgcttcccgttctccgttacccatgaaaattgtccaccatgg
aatttgttgtcattcccagccaagattgaatcaagcggactgagcttcag
caacctcggcgcggcgatcctgcttcccatacgcccactgaacccggtct
tctccttgccatccttgtccttgaagatggtgcagatcaaaaccaagtat
gtgtct

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