Query (optional)   in Class  

GrainGenes Sequence Report: BE422968

[Submit comment/correction]

Sequence
BE422968
Contig
Ta.2797.2.S1_x_at
NSFT03P2_Contig3181
Tracefile
[ Download ]
[ View ]
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC308916
wEST map position
BE422968
NCBI UniGene
Ta.2797
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'ADP-glucose pyrophosphorylase'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
1AL
1BL
1DL
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0059_G06_M11ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0059_G06_M11, mRNA sequence.
Other Name
WHE0059_G06_M11ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0059_G06_M11
Probe
WHE0059_G06_M11
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
Ta.2797.3.S1_at450WHE2AFFY
[ Show all 35 ]
DNA
accgtcgtgtagagcgccgccgggtcggcgcgacaacctctgtgctgcat
tgatcgtcgtcgttgtctcgaggccgggactgaagaagtgatcccgggac
gggagacgtttgaagcttgaatgatcgagactgaaagagaaggcgcgcgc
atgcagcattagtggtaaagtaagtagtaagtagcagtggaacaaagtaa
tagtcgtttttcccctgtactccctcttatatttctttacggagggagta
ataaataagaggctgtgtgttgaggtaaagaagtggcagcgatcaaacaa
actcccgggggatgttcgtgtaaataaaactctatctagacttgtgaaat
tttcagggggttttcccgtcaa

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.