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GrainGenes Sequence Report: BE423167

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Sequence
BE423167
Contig
Ta.27272.1.S1_at
NSFT03P2_Contig12418
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC324565
wEST map position
BE423167
NCBI UniGene
Ta.27272
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Clone wlmk1.pk0004.g10:fis, full insert mRNA sequence'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
1DL
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0061_C07_F13ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0061_C07_F13, mRNA sequence.
Other Name
WHE0061_C07_F13ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0061_C07_F13
Probe
WHE0061_C07_F13
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
Ta.27272.1.S1_at238WHE2AFFY
Ta.27272.1.S1_at198WHE2AFFY
Ta.27272.1.S1_at98WHE2AFFY
Ta.30384.1.A1_at224WHE2AFFY
Ta.30384.1.A1_at143WHE2AFFY
DNA
catcaatgccactgatcatgaaattccctaaccccaaacctacacaaata
cctagaatttacatcacaccaccattaatacaactccataacagttagac
gcactagtcccagctgcttgtaggaataaatacgagtccacaacaagtga
aaaatcactaacaaaataaaaatgacaagctgagaaaaaaagatcttaaa
aaatctagccatggctgtcagaatctattatcaatatttctctcaaaagg
atttctcttctatataaagtataatattacaaggggcagcttaaatatca
tgaagttgaaatgtaaaaagggtaataatcaacactacacga

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