Query (optional)   in Class  

GrainGenes Sequence Report: TaAffx.132299.1.S1_s_at

[Submit comment/correction]

Sequence
BE423184
Contig
TaAffx.132299.1.S1_s_at
NSFT03P2_Contig12719
Tracefile
[ Download ]
[ View ]
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC310117
NCBI UniGene
Ta.56536
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, moderately similar to NP_001050425.1 Os03g0431100 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0061_A11_B21ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0061_A11_B21, mRNA sequence.
Other Name
WHE0061_A11_B21ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0061_A11_B21
Probe
[Wcl926ct1799cn2394]
{SpCl-323}
BE423184
CFE49
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA
tcgacaaccaagcgaatagttgcaatgcagagaggttcataaacatggat
caaacaaaggaggcgataatgcccgacgagaaataataattaagctacta
gcagcatttctccgtcagagaaggatagctcagtcccagttgcacgaagt
tgatcgtcgtcttcctccctccctccctcctcagaagcaggcgtccagga
gacagcagcagcaaagggcggccaggcatccctccatgaaggaaggcccg
ctgctctgctgctgctgctggtggggcggcggctgctgcgcgtactgcgg
cgggtagccctgctgggggtagccggctggcgggtagccctgcgccgggg
gcgggtagccggccggagggtaccccggcggcgggtagccgcccttgtcc
ccgtacccttgcggcggcggggcgccgacgggtggctgctggttgtagta
gctcatctcctcctcctcctcctctggctccggggtctctcgctggttcc
tcgcggcgatcggggcacgcgcag

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.