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GrainGenes Sequence Report: BE423843

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Sequence
BE423843
Contig
Ta.8120.2.S1_a_at
NSFT03P2_Contig12219
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC299014
wEST map position
BE423843
NCBI UniGene
Ta.8120
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, moderately similar to NP_001047055.1 Os02g0538900 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
6BL
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0067_H08_O15ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0067_H08_O15, mRNA sequence.
Other Name
WHE0067_H08_O15ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0067_H08_O15
Probe
WHE0067_H08_O15
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
Ta.8120.2.S1_a_at686WHE2AFFY
Ta.8120.2.S1_a_at565WHE2AFFY
DNA
cattgctgatcttgaaagaactgttgactctcttcagaacatgggagctg
atttggctgtaagagtagcatctcatttccagcttcgcaatgctctatca
atggaaaacaagcaactgaggagacagattgctagtcttcagcaggcaaa
actaatgaaggatggtcaaacacatttcttgaagaaggaaactgagaggt
tgaagcagatctctgcgcgtcaccgcaggagcaggagtgtcacttcttgc
tttgagccgggctcaattggagcagacccatcagcaatcaattggcagac
agttgacatgtcaaagctgagcttaaacggcagtcctgctcctgtgcccc
cgagaggtggctatggcctgtaaaagcaacctgctttggtcccactgaga
tgagatcgcggcagtaatcctcagatgtggttaacgattcactaacctga
ccaaccatatagattcgagggtttaatcctttattaggaagaaaaagtag
tcagtccagttaccaccaaaaat

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