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GrainGenes Sequence Report: Ta.23798.1.S1_s_at

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Sequence
BE424208
Contig
Ta.23798.1.S1_at
Ta.23798.1.S1_s_at
NSFT03P2_Contig18439
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC315580
wEST map position
BE424208
NCBI UniGene
Ta.58
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'CM16 protein'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
4BL
4DL
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0075_D01_G01ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0075_D01_G01, mRNA sequence.
Other Name
WHE0075_D01_G01ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0075_D01_G01
Probe
WHE0075_D01_G01
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
Ta.23798.1.S1_at1179WHE2AFFY
[ Show all 16 ]
DNA
tttttttttttttttgaagcgaaaagattccctttattcttattatccat
atatatagcagatagcaccacacatgatgagcgcgcggagctcgtcctat
atgtatatatgcatgtcacacatgtatggtcgcaacatgcttatttattc
atgagcgagagaattgtctctagctccactgagactcctccataccgagg
cagtatggggtgttgtgaacggtcgtcaagttgcagtaccccggagtgac
gagtattgggacgaagttcatctgcacctccctagggcatccggggagtt
ccatgaggccgctctgatccgggcgagacttcggccccatgaagtagcgc
agcgcctggcatcggcactgctgcggaatgtttgcaagctgctcacagca
ctcctgcttggcgaggtacggcggcccgggcatttcgatacgacatgctt
gttcttccacatagttacggcagcttgggagtggagtgatcagagtactc
gtccatggggtgcaatcttcattgccgacggcggcaacggcggcaaagat
gaagactaggagggccgcgaagaggagattgtagttggacttggacgcca
tatttttggatggaggccaa

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