Query (optional)   in Class  

GrainGenes Sequence Report: BE424229

[Submit comment/correction]

Sequence
BE424229
Contig
Ta.27098.1.S1_at
NSFT03P2_Contig1402
Tracefile
[ Download ]
[ View ]
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC326306
wEST map position
BE424229
NCBI UniGene
Ta.27098
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Clone wdk2c.pk018.o8:fis, full insert mRNA sequence'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
3AL
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0075_A06_A11ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0075_A06_A11, mRNA sequence.
Other Name
WHE0075_A06_A11ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0075_A06_A11
Probe
WHE0075_A06_A11
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
Ta.27098.1.S1_at902WHE2AFFY
[ Show all 18 ]
DNA
atgcgattccctttattcattcatgaaatctctgacgactagcgctcgca
aatcaacacacgcatacacacatagatatatagatctactatcgttcagc
taatatcacacacagggaatcatgcatccagtacgcgagaacaaagtagc
cagggccatctaggcaaggcatctagcagtccttggtgcagtggcagtgg
cgctggacgccgacgcacttgccggcggtgaagccctcggtctggcagac
gttcgcacagttggtgtcgctgaagcacgccccatggaacttgtggctat
ccgactcgcaatccctcgccagagccacctgcaccgatcccccctgctcc
tccgtggcgacgagaagcagcaggaggaccacgaagaccttcgcggacag
acccatggcggttccttgtgaaggatgaagaggattgtatggtagaatgt
gaaag

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.