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GrainGenes Sequence Report: BE424255

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Sequence	BE424255
Contig	Ta.497.1.S1_x_at Ta.497.2.S1_a_at TaAffx.105748.1.S1_s_at NSFT03P2_Contig15637
Tracefile	[ Download ] [ View ]
External Databases	Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index	TC331387
wEST map position	BE424255
NCBI UniGene	Ta.35284
DB Remark	Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, strongly similar to NP_001067798.1 Os11g0433500 [Oryza sativa (japonica cultivar-group)]'
Keyword	EST
Germplasm	CHEYENNE
Species	Triticum aestivum
Cultivar	Cheyenne
Chromosome	4BL 4DL
Clone Library	Wheat endosperm cDNA library
Tissue	Endosperm
Developmental Stage	5 to 30 days post anthesis seed
Data Source	genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title	WHE0077_F06_L11ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0077_F06_L11, mRNA sequence.
Other Name	WHE0077_F06_L11ZS  [ wEST-mySQL (obsolete) ]
Strain	lab_host E. coli SOLR
DNA Library	TA001E1X
Clone	WHE0077_F06_L11
Probe	WHE0077_F06_L11
Remark	DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer. Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology	Ta.497.1.S1_x_at 973 WHE2AFFY TaAffx.105748.1.S1_s_at 242 WHE2AFFY
DNA	tgcacgctcagcacgctgctggacgagttgcagcctgacagtggccggtt gaggctggcaaccgtgccatcaggtgcacgggtgttgcgctaaatgtggc ggctgggttgcttggggcgtgcgtgcctgggactggcgcaaggattattg cgctacttggcgggccatgtaccgaaggtcctggagtgattgtatcaaaa gatttgtctgagccagttagatcacacaaggatcttgataaggatgcggc gcctcatttccagaaagccgtcaaattttacgatggccttgccaaacaac tggtcagtcaaggtcatgttctagatgtgtttgcatctgctcttgatcag gttggactagctgagatgaagcttgctattgagagaacaggcggccttgt tgtcttatctgagagttttgggcattctgtgtttaaggattcttttaaac gtattttcgagggaggtgaacattcattgggcctgtcattcaatggcaca tttgaaataaact

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