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GrainGenes Sequence Report: BE424566

Sequence
BE424566
Contig
TaAffx.90016.1.S1_at
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC289117
NCBI UniGene
Ta.40104
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, strongly similar to NP_001062059.1 Os08g0480500 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0086_D01_H02ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0086_D01_H02, mRNA sequence.
Other Name
WHE0086_D01_H02ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0086_D01_H02
Probe
BE424566
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
TaAffx.90016.1.S1_at527WHE2AFFY
TaAffx.90205.1.S1_at214WHE2AFFY
TaAffx.90205.1.S1_at188WHE2AFFY
DNA
gtaatgtgctctccaactccttaaggcttgctgctgcttcctgcccaatc
ctctccagcattctctctgtctcctctgactgttgactgagcacttcaat
cctcctatcaacattctcactcaaagaagcaagcccaaaagagatagctg
tcctcttaagttccgatactattttcaacagacagtcctctgaatgcacc
atgcgggaggcgcgcatgtccatctggaatgcctcctgcgagttgcgcac
cggcgggtcgttgacgcgggcgatgttgattagggcggagaagtt

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