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GrainGenes Sequence Report: BE424589

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Sequence
BE424589
Contig
TaAffx.128740.1.S1_x_at
NSFT03P2_Contig14450
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC280571
wEST map position
BE424589
NCBI UniGene
Ta.56390
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Expansin EXPB11 protein precursor'
Keyword
EST
Germplasm
CHEYENNE
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
7AS
7BS
Clone Library
Wheat endosperm cDNA library
Tissue
Endosperm
Developmental Stage
5 to 30 days post anthesis seed
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0086_A10_B20ZS Wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0086_A10_B20, mRNA sequence.
Other Name
WHE0086_A10_B20ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA001E1X
Clone
WHE0086_A10_B20
Probe
WHE0086_A10_B20
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA Homology
TaAffx.128740.2.S1_x_at733WHE2AFFY
[ Show all 25 ]
DNA
aacatttattgatattgatatagaaggatggacggacacacttgcaactg
gacatcacaggcgacgtctcagccggctacataggcacgcacgcatgtac
cacaattttttctcttcaaatcagggtactacccttttcattagtttcat
atatatatgggcatatctggccgatcgatcagttaatgaaactggacgag
ggagctgtaggttttgttgggtttccaatcgatgggaatgacctgttcgg
cgacaagtgtcttgccggactcgttggtgatgcgcaacgagaatggcgcc
ttcatggggtggtgggcatccatcctccagatggaaccccatgactcctt
catgggcacccactgccctgttggagccatcttaccgccattcggtcgcg
actccatgatgtccagctgattcacatcgccatcgccgttctcgtactcc
accaggattgccatgtagaatgggttcgacccctcctccacgtggaacgt
caccgtcagccccggatactgg

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