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GrainGenes Sequence Report: AA039540

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Sequence
AA039540
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA039540
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
AAAAATTCCAAAAAATTCAGTTCCCCATCGCCATCTCACACTTCCCATTC
CCGACGCCTCCGACGACGACGACGACCCCGGCGACGGCTGCATTTCTGGA
GATATACGCACGCATGACCTCTCCGCTGCACATCCCTGCACCTGCCGGAT
CTGGTAAGCCCCCCCCCCCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCCTTACGACCCCGCGCGACCGGATTCAGTTCAGTTATCCGAAGGGA
ATTTGTGTGGGCGGAGAACTAGGGTATGCGTCTTCGTGCTCCTCCGCCAT
TTTTTTTAGCGCGACCAAGGTTTACTCTCGATTTTACTTGGTCCAGGCTG
TTATGCTGCATCCATCGGTACGGATTCACACCATTCGGTGACGAATTCAT
GTGTAGTAATTCTAGACTTCTGATTTAGCACAGATTCTCCACCACTCATG
GGAAATGGCGATAAAGAGAATGTCTGCCAAGACCACAATATTGTCACCGA
TTGCCCAACGCTGCACAGAGAGGGGACTGTCTCTACAAAGAGGAAGAAGA
AGCCTGGAGGGTTCAACCTCAGGAAGAGCATAGCATGGAACCCTGCTTTC
TTCACCGAAGAAGGTGCAGTAATTCTTTCACAGATCTTTCTGTTAGATCG
GGCTGGAGCTGATGGGTTTTGTGAAATTCACAGGTGTCTTAGATAATTCG
GAGCTTTCTGTGCTCAGTGGCTCCCAAATGAAGCCAAACAGGAGCCCTGG
CTCAGGGGTTGGTGGTACCATTTCCCCATTGTGTAGGTTTGGGAGATCTG
GCAACACATCTGTACTGAAGGAAGCCGGGGAGAACTCTCGCGGCAAATTG
CTTGTGAAGTATCGGAGCGCTGAGAACAAGGGAAGGAAATTGTTTTCTCC
TGCAAAAACTTCTGAGCGGGTTGAACATAGAGAACTTTTGGTCAGTTCAT
CACTCAGCACATTGTTTACTTATGGTAGTGGTGGACACTAATAATCATGC
AATAGCACTCCTATTTCTGATCAATTTCTGGAAAAACAGGATAAGAGGTC
AGCACGAAGCATGCAAAATTCGATACCGCATACACCAGCAGGATATGCAT
ATCCTTTGTCATGTTTTACGATAATTGGAGAAGCCTTTACTTATTTTTAC
CAGCAGTATGTTTAACTTATAATCGATACCATTGTTACGAAGATTAAGTC
TTGGTAACTACAAATGTTGTTTTTCTTAACTTGGTTATACACAGAAGAAG
GTGCCAAACTCAAATGCTACAACTCAAATGACAAGAACACCAAAAATGTC
ATTTCAGCCTTCTATTCCTATGGTCCCTAGAAGTGCCTCATCAGTGACAA
ATATTTCTAAATCAAACTCAAAGTTACCTCCAGGTATTCTTCTGTATATC
GCTTTTCAAGGAAGTTAAGTCCTTGTGTACTCAGGGATTTTCTGTTACTT
TACCTTAGTGCCATTTGTCTGCTACTACCTCCGTTCGTAAATATAAGATA
TTTTTAGCCTACCAAAACATCTTATATTTAGGAACAGAGGTAATATTTAA
CTACTTTATTTGCACTCTTTGTATGTTACTACTAACTAGCTAACTTGAGG
CACTGCTATTTTTCAGTTAAAACAGAGCACCCAAGTAGAGTGGAGGCACT
CCAGCTTAAATCAAAGATTAAGCCTACACCTTTGATTAAATCCTCTGGAC
TTACCACAAAGAAGGATGTGGTGAGTGTTTGTACTGATTACCATCGTAAT
ATGAGAAATCTGTCCATGCGCCACCGACATTTCATGCAATGTTATTCTAT
CCCTGAGTTTTCATCACTCACCTAGATAAAACTAAAGGTCTAAAATCATG
CCTAGTTATGCAATTGAAAACAAGTGTGGGTATTTTAGGTTTACATTTTC
AAACTATAAGCAACTTCATTATATATTGTATTTCCTTCTTTAGGTGTCCA
CAGGTTTAGATTTATAATTCTTGATGTATGTAGGATTTGACCATCTCAAA
TATGTTTAGCTGAAATAAAACTTAGTGCTAAACTGACCTTTTAAGAATTC
TAAGTGTTACTCCTTCCGTCCCAAAGCTTAAGGCTTATATTTTTTTTCAA
AAGTCAAACTACGTAAAGTTTGACCAAGTTTTTAGAGAAAAATATTAATA
TTTATAATACGAAATTCATACCCTCTGATACATCATGAAACATATTTACA
CATGGTATCTATATAATATTATAGTTTTTGATAATTTTTCTAAAAGTTTG
GTCAAACTTTCTGTAGCTTGACTTTTCAAAAAAATCCTTAAGCTTTGGGA
CGGAGGGAGTACATAATATGATTTGCACCATTTGGAGAATTGTTTTCTGC
ATTCTTGTTTGCAGTAACTGAAACTTACCTGTTTATTTTTCAGGCTCCTG
TTACAGCCATCCATGAAGAAGGCAATAGTTCTAGGAAATGTGCAAGTTAT
TCAACTTATTCACAAAATAGGCCCTCCAGTTTCGTTGGTGTCCCTGCATC
AACTTCTGCTAAGCCATCGGCACTACGCATGCCTTCACCTTCAGTTGGTT
TTTTCTCTCAGGTTATGTTCTTCTATTTCTAGCCACATTGTCACATGTGA
AGATTTTACATCTTCATTTTTTTAAGAATACATGTTTGTTTCTTTGTGGT
TTAATGTACTGGTGTTATTTGTTGTTCTATATTTGGTATGGAAAATAATG
CAATCATATTAAAGCCACTTGAGTAATAAATAGACGTGATTCTATGCAAC
GTTCTTGGTTGCATATCACCAAACTTTACAAATTAGTTCCCTGCAAATGT
ATGACTGATTTGTGTGGACATATGGAGTGCACTAGCCATTAATTGCTATA
GGGTTTGTGTATAATTTCTTTTGTAGCACGTGGGATGATATGAAAATTGC
TTGTCAGAGAGACGACCATGCTACAGACACTACTTTTAATTTTTACATAG
GAAGACTCAACCAACAAGGCACTAGCACCTGGTGCCATTGTCTGTACAAG
AATGAACGGGACACCAGGCATCCCATGAAATAAATTATGCCAATGGGAGT
CGAACCCTGGAATGTGTATTGTGTGTGTGTGTGTAACTGTGTATGGGGGG
GGGGGGGGGGGGGTCGTGCAAACTGCTCAGTTCTCACATATAAATTTTGC
CATAGGCAGAACTAAATAGATGTCTGTACGTTAGTACATATGTTATTTGT
CTTCTTTGTAAATTTATGTTCCAAGTTTTCGTGCTCTTCAACTTCTGAAA
TCTGTCAGCCAAAAGGCTTAGAGTAGTCTTGCCATCCACCTGGGATGTGC
ACTGAGATGATAGGACCACCTTGTAACCCGCCTCCTAGGAGGATGTAACC
GAAACTCTACCTGTTCAATGCAATGAAACGCAAAGGTCCTTTGCGTTTTC
TCAAAAAAACTTCTGAAATCTGTCATTTAATTCTTAATTTCTTGACAGTT
TATTTGGTATTTTGTCAATACAATTTTCTTGAACACCGTCAAAATTTCAC
TGATTGAATGATTGTTTTCAGGAAAAGGCTCTTGTGTCACATGACGATGC
TGTTCAAGGAAATGCAAAGAGCTGTATTACTCGAAATACTTCATCACTTG
CAAAGCCTCCTAGATATAAGCAGCCTGAGTATGTAAATAGCAGGCTATCT
CAGGCTCCTGTATCGAATGGTGATACTGCTGAAGGAAATGCGAAGGTCTG
CTTTACTAGAAATATGTCAGCACTTGCAAAGCCTCCTAGATATAAGCAGC
CCGAGGATTTAAAAAGCAGACTCTGTCTTACAGCACAGCTGCCAAACAAT
TCAGAGCCGCTTGTGCATCCGGTAATCAGCACTCGGGCCTCTTCATTATC
TAGTCTAGAGCATGACAATGTGTGGTCTGGGAAAGAATCCTTGTCAGAAG
TTATAACAACATGCCCAGAAAATTCAAGAAATGCAAATAATGAGCCCACA
CGGAAGGTTGATTGCTTCTCTGCTGGAAGTGGAGCTACTACACGATCACC
CGGTTCAGAAAAGAATGATGGTTCCAGAAATGGCGTGCCAAATGCGTATA
TTGTTGCATCACATGTAGGAGGGGGCATTATGAACAGAACTGAACCTAAT
GATAATTCACATTTGCTTAAATCTATTTGCTCCTCGACCATTGAGCATGT
TGAGGACTCCTGTTCTCATGAAGCCGCTATCAACTCAATGAAACCTATTG
TGGCAAGTATATTGTCATCGTCTTGCATTTCTGAAGTGTGCACCCTTGAC
AATTTTATTTGTGAAAGCAAGTCAGAAAGTTGTGCTGGTGTAGCAATTGA
CCTGGAAAATTCTCTTCCTAGGGACACAATGGTCGAAGTTTCTTTGTCAG
AAGGCAACAGTTGCACTCCAGGTGCTGACTTGCGAGATTTTGATTCCTGC
AATCAACAACGTACTGAATGTTCCACTAGGAAATCAGTAGAGTCTACATC
ATGTGCAGATCGGGTGCCACAGTGTGGTAATTCAGTTGATATAAATCCAG
CTTCAGCTGACGGTACAACAGATTTGCATGGCTCTTTTTGCAATGAAGCC
AAACCTAATTCATCAGAAGAACCAAATACTGATGGTAGTGTCGACTTTGT
TTCAGATAGTCCATTGATTGGTAAGGAAGTTCAGCTGTTAGTAGGGTCTG
ATTGTGACAATGATTATAGGAGTACAGAATGCCCCCCTATAGAACCAGAA
GCATCTGTGCCTTGTCTTGATTTTAGTGATCTAAAAGAAGTCACAGTTGA
TTGTAGGATAGAAACACATGATCCTTCAGCAGTGGAAAGACGGCCTGTTT
TATTGGAAGAACCCAACACTGAAGACGATATGGATCTTGACTCAGATAGT
CCACTGGATGGCAAGGAAGTTCAGCTGTTAATAGGGTCTGAGTTTGAGCA
TGATTACAGGAGTAAAGAATGTTCCCCTATGAAACCAGGAGCACATGTTC
CCTGTACTGATTTTAGGGATTCAAAAGAAGTCACAATTGACTGTAAGGCA
GAAACACATGATTCTTTGCCAGTGGAAAGACAGCTGGTTTTACTGGAAGA
ACCAAATACTGAAGATGATATGGAGCTTGACACGACCGAGTTGTCAACTC
TAGAGGATGCAGCACCTATAGGGTATGCCTGCACCAAGTATATATCGAAT
ACATAAAATTCAATGACTTCAGTTATATAGTGCATTGATAGTGTCTCCTA
ATCCTTTGCAGAAAGAAGGCAGTCCACAGATCAGCCACAAATACCATCAT
TAAAAATCATCTAAAACAATTGGTGCCATTTTCGGAAGAATGGCTTGCCG
CCATGGAGGCTTGCGGGGAGGTCAGTTTACTTGACACCATCGACTTTTCA
AGCTTTGTATTTATATGAATAAGTAGCATTGGTAATTATCTGAATTTTTT
GTAAGTGAGATGCTCTATACAGCTATATAATGTACGATATCCCTCACCTC
CTAAGCGACAAATGTTAATATTAGTAATAATTGTTTGTTTTGTAGTTCTC
TGTTTTTATATCAGATTGATCATGTGATGAATCTGATCAAGCATCCTGAA
ATTCATATTTGAACCCAGTATCTTGGTAGTACCTTATTTAGGACCATTGA
ATTGCTATATTCCGTGATGTAAATTGCATATTGATTTAGTTTCATACCAA
CCAGGGAAAAGCAATTGGATTAAGCTTCCTTCTAATTTTACCAGAGCATT
AGCATTCATCTTACTATTAGTATATCTTCCCATTCTTCCTTCCTTTTCCT
TCTCTTGGAGAAACAGTAGAGAATGCCCCACATCTGGCTGTTATGATTTC
CACTGAATATATCACAATCTTCACCTACGAGGTTTGCACCTGACATGTAA
ATATGTTTTAACAGGAAGTTTTGGAACAGAAGAGTGGAGCTGTGCAAAAT
TCTCCTACCGACAAAACTACCCCAGAACCCAGTCCGTGGTCACCGGTACG
CTCCTCCATAATTGCAAACATCTGATACCCTCTAAACATGCATCAGGTGG
TGCTTTAATGTTTAGTGAGGTTTAGGAATATGTACATGCAATAAATCTAC
TTAGAAGAAGTTCAATGTTTAAAAAATTCTTATTTGAAGGTCCATTCATT
TCAATCTTGATGGTAGAACTTCAATTCTTGAAATGCGTAATTTAAATTCA
CAACATCGAATCGGTTATTTCCGCAGAGAGAAAATAAGGATACTGATTTA
GTTAGGACCAGTAGATTCCTTACAAACAGAAGACCATGCATTCTGTTTTT
TACGAACTCTTTGTCATCTGGCGGAATTCAAGATATTTTGTATCTGTGTC
TGCAGGTTAAACGCAAAGCTCAAGATGTTGGTCCATTTGACTGCACCAAA
TACTCCAAAAGCGTCCGAACAACTGACACTCCTTGACCTGCAACAGCTGC
ACTTCACCTTCTCATGAGGTACCAGCAGACACGCTCTACAAAGTCAGAGC
AACAGCTCGGAGCCTTGTGATCTAGTGCCACTGAATCTTACTTTGGTCAG
TCTAACAGCCTCGTTGAAGTGCCTTTGTTTGTTACTTACCTCCCATTTGT
TCCCTTGAATTGTAAAATCAGTACTTTTGGGACCACGACACGAGCAAAGC
AATGCTTGGTAAATAAAAGAGATTATTTCTTCTGTTCGTCTGAATCCTCA
TTAGCAGCTAGCTATCTGAATGTTATCTGGACGCCATAATGTTTCTGACA
AGGCTTTCTTATGCCTCTATTAATAATCTAAGAAAGCCAGCAATCTGATT
AGATACAAAGTAAAATGGCCTTGCCATTATGCAGTGATGATGATACAACA
ACAGCAGTATGTATACAAGTATCTCTTTGCGAGTTTGTAATTGTCAAAAC
TTTCCCGGGAGGGAAGAGGCGAGGCCCGTCATATGATGCTATGGCGACAT
CAGAGGTCGTCATTGTCGTTGTCGTCGCTGCTGATGAGTGGCTCAATCCG
CCACTCGCTGCCGTAGTAGGAGTTCGGCAGGCCGAGCCAGAACTTGAAGG
CCTCCGCCGCCCTCTTCCGCTCCCTCCGGCGGTCCTGCCTCGCCTGCGAC
GCGTGCTTGCTGGTGAACATCCTCGAGTGCATCTCGATGTAGATCTTCTT
GTACTTGGTCTTGTTGGGCGCGATGCCGTTCTCCTCCATGCACGCCACGA
TCTCCAGCGCCTTCTTGAAGAACGCTCCCCGGACGCACACGTCGGCCAGC
GCGTCCAGGAGCTCCTCGTCCGGCTTAAACGTCGGCTTGCCACCGCCGGC
CTCGCACCGCTCCTTCACCTCGTTCCACAGCAGCAGCGCCTCCCCGGGCT
TCCGGGCGATGGCGATGCCCTTGGCCAGGCTGCCGTAGGTCGCCACGTCC
GGCTGCACGCCGCGCTCCTTCATCCTCTCCACCGTCTGCTTCGCCGTCTC
AAGCAGGCCCTGCTGGCAGTACCCTTCCACCAGCATGTTCCAGGCCGCCC
TGTCCACCGTCACCCTCGGGTCCTTCTCCATCTCCTGGAACACCTTGTGC
GCCACCTTGGGCTGCCCCGACGCCGCGAACGCCTTCATCAGCGTCGTGTA
GCTCACCATCGACGGCGCCACGCCCCGCGACCGCATCTCGTTGAACAGGG
CCAGCGCGCCCGCGCTGTCGTCCATGAGCACGCACCCGTCGATGAGAGTG
TTGTATGTCACCACGTCGGCCTCGATGCCGGCGTCCGTCGTCATCTCCTC
CAGGAGCTCCCGGGCCCTGCTCATCTGCAGCTGCTGGCAGTACCCCTTGA
TGAGCACGTTGTACGTCACCCGGCTCGCCGGCACCCCTGCTCTCCCCATC
TCGTCCAGCACGGAGTGCGCGCCCTCTATGTCGCCCGCGGCGACGAGGGT
GGATATCACCGTCGTGTAGGTGACGTGGTCGGGACGGCTCTCCGGCATCG
TCTCCCCCTCTCGCCGCATGGCGTGCGCCATGGCCACCACGTCGTCGACG
CGCCCGGCGTTCATGTACCCCTTCATCAGCGTCGTGTACACCCTCGAGTT
GGGCAGGTACGTCCTCGGCAGCAGCGGCGCCTCGGTGCTTTCTTTCGGCT
TGGTGCCGACGATGTCCTCGAGCGCATCGCTGTGCTCGACGACGATATCG
TTGTTGTTGTTTCCTTGGGCTGCCACTTGCCTGAGCAGGAGACAGACGTC
GGTGCGGCCTTCCCGCATGGCCTGCACGATCTTCTCCGCGGTGGGGATGT
CGCCAAAGCCGACGTAGGCGGCGACGAGGGAGTGGAAGGTGGTGGCGCAG
GGAGCGAGGCCGGCAGTGAGCATCCGCTCGAGCACGCGTGCTACGAGGTC
CCGGCGGCCGGCGCGCGCGCACATCTTGATGGCGATGTTGTAGGTGAGTG
CGTCGGGCGCCGCGCCGGCACCCCAGCCGCGCATCTCGTCGAACAGCTGG
CGGAAGCGGCTGCAGTCCCCCGCGTCGGCGCAGGCGCTGAGCGCGGCGTT
GAACGCGGCCGTGTCGGGGAGCGAGAAGGACGGAGGAGAGGGGGAGACCG
GGGCGCGGCGGAGGTGGTGGAGGACTGCGTCGAAGAGGCGGAGGGCGCGG
GCGGGGCGGAGGCGGGAGATAGCGGCGGTGTACGCGCGGCGGTCGGGGAG
GAGGCCGCGGCGGAGCATGGAGAGGAGGAGGGAGTAGGCGAGGTGGGCGT
TGCCGGAGCGGGCGGCGGCGGAGGCGGCGAGGGAGAGGGAGTTTGCGTCT
AGGAGGCTGAGCCCTCCCTGTTGGCGGAGGCGGTGGAGGAGGCCCGCAGC
GCGGGAGAAGGTGTGGGAAGACGTGGAGCTGTAGGAGAGCTGGGCGAGCA
GGCGGGAGGCCGCGGTGGGGGACTCGGGGAGGGAGGGGGAGGAGGCGAAG
AGGCGGTAGGCGGCATCGGTGTCTCCGGCGCGGAGGAGAACGAGGAGGGC
GTCATCGTCTTCGTGGGTAGTAGAGAGTGGTGCGGCGGGGGAAATGGCCG
AGTGGAGGATGTGGTGGGTGCGCGAGGAGGAAGAGGAAGTGGTAGTAGTG
GTGCGCGGCGGCGGCGGCGAGAATGGTGGTGCGGTGGAGAAGGGGACGGA
TGGAGGGTTGGGCTGGAGGTGGAGCTTGCCGTGCAGCATGATGGATGCTC
TGGGCTGCCCTGTTCAGTTCAGCTCGAGAATGGGGAGGAGAAGAGCGGAA
GGGAGGGGATGACGCTGACGTGTTA

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.