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GrainGenes Sequence Report: AA031054

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Sequence
AA031054
Germplasm
CC7277 (oat)
Species
Avena atlantica
Probe
AA031054
Reference
ReferenceMaughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA
GTACCACCTCTTCCTCCACCTGTCTCCCTCTCCCTCCTCTTCCTCATAGA
GTATCTCCGTGCCGTGTCCTAGAGCCTCCGTGCCGTAGCACAGCGCCACC
GCCGACGCCTCACCCTACAAATCCTCCGCCTCTCCCGCGCGTCGCCACCG
TCGTCGCCGTTCCCGTTCCTACCTCGTCGCGTCCCTGCTGCCTCAACCCC
GTCCGCGATTTCGGCCCTCGGTTTCCGAGGTACGAGCATTTCGTCATCCA
GTGTTTATTCAAACCCCATCGACCTCCAGAATTTTGGGTACATCATCTAA
ATCCGCCCTCGTCTCTGGTCGCAGTTCTCCCGCTCCCACCTCCGGCAAAA
CCTAGGGTTCGGCGTCAGGATGCAGAAGCTGGGGCTCTCGGGGCTTAGGA
GCCTCGAGGGGTTCCGATCCCTCGCGGGACCCACCTCTACGAATGGGAAG
CCCACGAACCCCAAACCCTCGTCGGATGTTGGGGGTGGCTCGTACGGGAG
CTTCGCCAACCTTAAGATCACAGCAGGTACCGATTTGATTTCCCCCCTGG
TTCGACTTTAAGGAGGCTGTCTATTTCGTCCGTTGCACTGATTTCTCTCA
ATATGTTTCTATTTGCAGAGAAATTAGTCAAGGAGCAGGCTTCGGTGAAG
ACTGATCTAGAAATGACGGTATATTTCTGAACATCGTGCAATTTTTTGTG
ACTGTCGAGCACTTGACCGAACGGATTCCTATCATTCAACTGTATGGGCT
GCGAATTGTTCCTGAAATTGAGCCAGGCATCCTGTCACAGTGCCACTATT
TCGGTCTCTGCATACATTTGGATTTGGTATCTGTCTCGGTGGTGCCAAAT
GCCAATATAAGAAGATCTGTCTTCTGGTTGATCAATGCCAAAATTGCATA
GATTTATGTTACTTAGGGCTGTCTCAGTTGTATCATTCTGCTTGTATAAC
ACAAGGCTAGTTTTCTGTTTCTGGTTTTGTCCTGGAATTCTGAGAACAAA
TGAACTGTGTATAGTTCATCATGTGATCACATATGCAGGATCAACATGGC
AGTAGACTGTTAGAGCAGAATAGGCAGCACACAAACATAAAATCTTATCA
TTCTGGGGCTGCATGTGTTATAGTTAGTATGAATCTCATGATTTTACACA
TCTTTCTGTGGTGCTTAGACTCCATATTCTTTCCCTAGATGGTGCATATA
CGCAGACGTGCTAAATAAAGTCTACCTATGCCGTGTTATAGTACTAACAG
AGGTACACGGTGTCTTTTAAATCTGGAAGTATGCATCCTTTAAAATGTTG
AACTATACCTGTGACGGAGCTCTGTATATTTCTCACTTGCAAAATGTGGG
ATATGTTACCCTCTGTAGTTTCTGCTAAACATAAGGGAGTTAGGTGAAAC
TCTCCTGAACATAAGTAAAACTAACTTGTCCTTTAGAATCACTACCATGT
TACAGTAAGGGACTATTTGCTTTGTATCTAGTTCTGTTAATTTCAGAATG
GCATAGGTATGATAAGTTTCATTACCAGTTCAACACAGTTGCCTCTGATG
GTTTAGATGTTCCAGCGATGTGGTTATATGTTGCAAATTGGCTCAAGTAC
ATAACGTTATCACCATGTAGCGGCATTTTTCTGCAGCAACATCTTATAGT
GGTCTCACAGAATATCTTATTACTGATACATATGCTTTATGTGGTTTCAG
CATACCAAGCTGAAAAAAGCAACGGAACAGATAAATATGTTAGAAGCAAA
ACTTCAACAAGCTGTCAATGAAAACATGAAGCTTAAGGTGAAGCAGACTG
AAGATTCGAAGCTCTGGAAGGGATTAGATTCAAAAGTTTCCTCAACAAAG
ACCCTGTGCGATCAGTTGACTGAAACTCTGCAGCAGTTAGCAAGTCAGGC
AGAAAGAGGTAATATTTGTGCTAGCGTTTTGTCATGCAGACCTGTTCAGG
ACTAACTGTCAGAACGATGCAATGTCAGCTGAGGAAGATAAGAAGGTTTT
TGAGGAGACGCTTGGGAAGAACTCCAAGGCTTTAGATGAATTCGACCGCT
CGCTGCATGATACCTCGGCAAAACTGGAATGTGCAGAACAAAGTATCATG
TCAGGTTGGCCTTTCTCTTCTCACTTCACATGTAGTACTAATCTTCTAGA
ATGCCAACAATTAGTTAACTCACTGCTAGACTCTGCATATCTGCTAGGGC
ACCCCTAATCTGCTATGCTGTTGTTTATGTCATCTAGACCCTAATTTTAT
TTGCAACTCCATCCCTATTTATATGATATGGTTATAGATAAAACAATTGG
CATATGTAAATGATATCATTGTCAACTTTCCCGTTAACTCAGGTAAACAG
GAGATCTTGCGGATTAAACAGGAGAAAGAAGAAATGGATCGGAGTTACAA
AGAACAGATTAATGTAAATGATACTACCATAAGGGAAAAAGGTATGTGTT
AGCTTATCTGTACCAATTATGCAAATAAGAAATAGTATTGGCCATCTGTT
TAAATTGCATTATAATTATGTTGTGACAAGTTGTTATAACATTAGATCTT
CACTAAGGAGATAAGTCTATATCATTGTGAAATCTATTGGGGAGGTTTGG
GAAGTTAATATATGCTACTTCATCGAACAATTTCTATCTGGTACCGACAA
GATGCCCTCAGTGCAACAGTAGTAATAACAGGCAATAAGCTGCGTTTGCT
TTTTAAATGCAGATTCTCTCATCAAACAGTTGGAGGTTTCGGTTGATGAA
AATAAAGCCCGCTTGTTGTGTGCTGATTCCCGCCTGCAATGCATGGAGCA
AGAGTTGAAGCTAAAACAAGATGTTTGCACTTCCCTAAAAGAAAACCTTG
CAGGTGCTGAAAAAGAAAAAAATGACTTGGAGCTTAGGAACCAGGGATAT
AGTCTGGAAGTTGAAAGACTGTCCAAGGACAACAAAGATGCTAACGCGTT
GCTTAGCAGTTTTGTGGCTAAAGTAGCTGAGCTAGATAAAGAGCATGCAT
CAATGTCAAATCATGTCTCTCTATTACTTTCTTCATTCGAGAAGTACTAT
GGAATGGTCCAAGAGGAGAAAATGCTGATAACAAGATCTGCTAAGGACAA
ACTGGAACATCTTCAAAACCAGTTTGTAGATTTGACATCAGAAAACAGTG
GTCTCAAAATTGAAATTGGGGAACTGAAGTCCAGAATCACAGATTTACAG
AAAACTCAAGAAATTGTTATGGTTCAACATGTAGAAGAATGCCAAGTGGC
TGAAGATAAAATCAGAAGATTGGAGTCTGAAGCAGAAATATCTGCATCCA
ATGTGAATCGCTTAGAACAGTTATCTTCTGAACTGCAAGGAAGAGTTCAA
AAGTTACTGGAGGATTCTAGCCTTGCTGAAAATCAAAAGGTTTGTGAACT
AGCTGGTTAAGAATAAACGAACAATTGCTATTAAACCTGTGCTTCCTTAC
TCATGTGATTAGAATTTTGCAGGAAGAGTTGATACAGAAGAGTTTGAAGC
TAGAATCAGATAATCAGGAGCTTCTAGGCAGAGTGCAGTCAGTCTTGGAT
GAGAAATCTACTGATACAGAATCTCTGCAACACGAGATCGCTAAGCGCGA
CCTTCAGGCTGAGACATTTGAAAAACAGATCAGCGAGCTCCGCGGTTTTC
TTGACGAGAAGGAACAGTTGTATATTTCTTCTATAGAAAGAGAAAAGAGT
TTGGAGGAACAAAAGTTACAGGTTAGTGTTTATTATATCTTCTAAGTCTC
ATGATGTAATGGTCTGTAGACAAAATCTAACCTTAACCTCCTGCCCAGGT
CCAAGCATCACTTGCTGCAACAGAATGTCAACTTACCGAGGCCAAAAAAC
AGTACGACGTCATGCTCGTGGGTAAACAGATAGAGCTATCGAAGCATTTG
AAAGAGTTATCACTCAGAAATGATCAGGTATCACATTTGTATTAATGATA
TATTACTTCTCGTTCTCAATCACAAATGACAGTTTGCGAATGATTTTGCA
GGCAATCAATGATATCCGTAAGAAATATGAATTTGAAAAGGTAGAAATTA
TCAGTGCTGAAAAAGAGAAGGTAAATATCCTTCTAAGGAATTTCTATATG
CTAGATAGTTGGTATGTTAATATGATTCTTACTCTCTGTTTAAAATTTCA
GGCAGAAAAGCTCATAAGGGAAATGGAGAATAAATGTAACGAAAAGATAT
TAGAGAACCAGCGAGAATCAGAGAGGTGCTTGACACGTCTTAAGGAGGAA
CATGGCACAGTGGTAAGCAGAACTAGTTCGGTTTCTCTACATTTATTTTC
AAACAAATGAAGGTTGCAATCTAGTTCTGATGATGATACTTGCATCTATT
TCGATTGAATATGTTGATTCTGCAGTAGTTAAACAAAGTAAGCTGAACAG
TTCAGCTGCAGATAGTATGGGTAAATAACTGCATATTAGACTTCCAAAGA
AGTTCTTTTGCGCACAATGTTCACTGCTGAAGAGGCATTATTGCCAAAAA
ACTACTGAATTTCCTTGGCATTTCTTTTTGTTCTTGCTCTAAATAAACTT
GACATGTAAACTGTATAGGAAGTTTAAAAACACCCAGTGATAACTAAATA
AGTTGAAAGTATCCTCAAGCTGCTTTAGAGTAACATTTCCAACCTTTATC
TTTAATTTAATTGGCTGTAACATACTCATGAGAAGTCTGAGAACCACACA
CTGTATATTTCACCAATGTACATTGCTAAAGATCTTTAGACTGCACTGGT
TAATTTAAGCACCCATGGCTTCTTAAGCAGTCAAAATGCCATGTGATGTT
TGAAGTGGAAAATGCATCAGAGACCATTTGCTAGAAATTTCTCTAGGAAT
AGGACTTGACATTCCATTTGTTCCACAGCAGTTCAGAGATGCTATTTAAT
ATATGTGCAGAGAGAAAAGCTATTTAAAACATGCGCTGTTAACCTTGGAG
CTTTCAAAATCATTTTGCTATCAGTAGAATCCTTCATTATATCACCAGTA
TACTCTTGTCCAAAAGGCTGTTTGCATGGTGTCAGGCTGTCAGGACTAGG
GAGTAGGGAATCACTGCATACTACACAGTGGAGATGCACATAGAGCTGTT
TTTCTTCTGAAATGACAATTACAGTTGTTTCCTGATATCTAGGTGGCAAG
AATTCAACAGGATAATGAGCATAAGGAATCAACTCTTCGAGCTTATCACA
AAGAAGAATTGCAGCGCATTCGTTCACAGGCTGAGAATGAACTGAAGGAG
GTCAGTCATAAGTTGAACCAAATGTTTTGATTGTGTCAGTTTCTGTTACT
GATGAAATCTGGTAAAAAATGTAGAGGCTGTCGTCGCTCAGACAAGAGCA
TCAGGCTCAAATAAACTCAGTGAACGTACAGCATGAGGAAGATTGTCAGA
AACTTCAGGATGAACTGGAGCTTCAGAAGTCAAAGGTAGCGACTATTGAC
AGCTTTGTTCTAAAGGCCGTGACTGGAAACTATACTGAACAGTGTTTGGT
GCAGGAGGAGAAGCAAAGAGCGTTATTACAGTTACAGTGGAAAGTGATGG
GTGAAAATCAACAAGTTGATCAAGAAGTGAGTTCTAAGAAGGTACATTCT
CTATTTGCTAGTTTGGTAACTGTCTATTAGTACTATTTTACTAATGAATG
TGTATGTGGCTTGTATTCATTTTTGTTGGTGTTTGGTTGTAAGGAATGCT
AAGTGTTCAACAAAAAGAAACAGCTGCATATGTTCTTACTTGAAGAGTTT
AATCATATTTTGGCCATGTTTGGAGCAGATAGACTAATGTTCTCAACCCT
TATCCTGCCCTTTTCCTGTTAATGTCAATCATTTGCTGGTGTCCCTTTCT
AATTCATCTCATAATTAAGTTCTACACATTCATTATGAACTAAATAACTT
GTTATGAATTCTCTGTTTGATTGATAAAGAGGAGAGATCCATATGTCAGA
AAAGAAAGTCAGATTCAATTGGCAGGTCCTGAGACCAAACGGAAGGTAAG
ATATCTTCTCTTCAATGCTGTACTTGATTACCCTGCATCTTAGGAAGAGT
ACTCTCTTTAGAAACTCTTAATTTGAATGTTTTTATGTTGTGTTTCAGGA
TGTAAAATTACCTGGAGTTATACAATCGCCAATTTCAAACGCACTGAGAA
AGGTAGAGAAAGGAACTCAGGATGTTCCTAATCACAGAAAGGTGATTTTT
TTTATTTTATATACTCCCTCCGTCCCAAAATAATGACTTGGATTTGTCTA
GATTAGTATTAATCTATAACCTAAAACGCGTCTAGGTGCATGTGAATCTA
GACAAATTCAAGTCAATTATTTTGGGATGGAGGGTATATATATATATTTA
TTTATTTTTTTCATCTGATTTTGGGCGTGAACCATGTTTCATTTTGGATG
AGTTAATATCAAATCTATGTTTGCCTTCTGTATTATTTCTTTGCTATTTT
TTTGACATTCCTTTACTTAGGTAACACACCATGAATATGAAGTGGAGACA
GCAAATGGAAGAATCACAAAGCGCAGGAAAACAACAAAGAGCACTGTCAT
GTTTGGGGTACAGGCTTTTCCTGTTTTTCCTTTGCATTTGATTGTCTGCC
TGTTGCATTCATTTTAATACTGTCTTTACCCATTCAGGAGCCTAACACTC
AGAAGTCGTTGCATAATACTGCTGACAAGGATGTTTCAAGAACAAGAAAG
GTATGATGGTCGTCAGTATAAATTACTGTGTACCTCAACCTCCCAATATT
GACGTGTAAAGGTTTAACCAAAAAAATTTATGAACTCTGGAGTTTAATGT
TTTCTTATGTGGACGTTTACATACTTTATGTATAATCCTACTAAGGTTTT
CTTGATAAAGTAATCCTAGCTAAATCTAGGAAATTTTCCTTCTGATATGA
TATTTGTTTTTTTTGAATAATTATTGTATTGTTTCATTATTCAAGAATGG
TTTCTTGCTGTGGTCCTCTTACAAAGAAATGTATTCGATTTCATATGGCA
TACGGAACACCACTTCATGTAGATTTTAGAGTTACTGTTGTCAGAACTAT
TATTCATATGTGGGGAAAATGTTGAATTTTCTAGGCGTCAGAGAGTATCT
TTTATCAGATAGTCTCTATACTCATTATTTCCTTGCTATTCTCGTGATAT
CACCAATGGTGCTCGCTTGGTTTTCCCTCTTATCTAGCAATCTTCTTGGA
GTAAGTACCAAGTACAAAATTTAAACATGCTGATGCTCTGCTTTTATAGT
GACTGATCATGGAATAACATTCAGTCAGGAACTGTCTTTGGGCGAACATG
TCTTTTGACATTTATGCTTTTGCGTTCTGCAGGTTGTTCCAGGATCCCGC
GCCCATCCTGCAAACATCGGTGAACTATTTTCTGAGGGCTCATTGAATCC
ATATGCTGAAGACCCTTATGCATTTGATTAGAAGGTATACTGTTGCAGCT
GGTTATTTTTGGAGAATAGCGTTATAGCAATCTCACGGCTGGCATTTGCA
TTCTAAAACATTCATGTGTCATTTGGACTAATAGTGTCTCAAGATGCTTA
GAGTTTTGTAACTTGTTTAATACTCACATCCTTATATGACATATGGATGT
TCTTAGTATACTGTCTAAATTATAATAAAGATATTGACCTATAAACTAGT
CATGCTCTGGAAGTGGTTATATGATTTGACAAGCTTGCTGAATCTAGAAA
TATTGTTTTGACAGCGGTCATTCTTTGACTTATTTCCACCATGGCACCAT
GTTTAGTTTGCGATTTGGGTTTACGGTCTTTGCATGCTGCTTAGTGCCAA
CAGGGGATCAGAAATGGCACCATGTAAAGTTTTTTTGGGGGGTTTGCAAA
CATTTTCTCGACAACCTGGTCTTGACCATCAATAATCTAGCCTTGGAGGT
ATATTTTCCATTTCTAGTGATCGGTGACAGTATTTCAGTTCAATAGTTAA
GCAATGTGCACCATGGATGGTGGTATCCTTATGGGAGTTCTTTAACATAT
ATGCATCTTTTCAAGTTTTGATAGATCTGTAGTTGGTGTGATGGCCTTCC
ATAGGCACCTGTGTTATGACTGATCTGTAGTTGGTGTCATTGCATATCAA
TGTCTTCGTAGTCTATATCTTCCTGCTCAATGTTGTATTCTGTTCCAGCT
AAATTAACTGTCCCCTGAATTGAAATTACACCTGATCTTGCAGCTCACAT
CTGTTGGTGGCGATCTTTAGAAGCCTGAAAATGTAATCTGGATTCCAAAT
TCACTGCTGCTACCGGTTGAACCAATGATTTTACTGCCTGCCCAGGTCAT
GACATCTGATAATACCAGTGTTCATATGACTGTTATTAGCTCCAGTAAGT
CCTATGTGTGGAAATTGATATGATAAACACTGATATTTTGTGCGTAAGTG
AGCTTCTGTACATAAGCTGAGCTCGACCTAGACTATGGAGTACCTTTTAG
GATTGCTCTTCTTTATAAGGCTGAAACTACGGAATGATGCGTGGTGCCGA
TCTTAACCAGTCAATGTGGAATCATTCTGCGCCCACAGACCTTGTAAGTG
CGTGAAAACCGTATGTCCATCTTTTTTTTCCTTGAAAGAAAAAACCTTAT
GTCCAGCTTGCTGCACGGAGTCTATGCCTGATCATCGTATTCATCCCGCT
GTCCTGCTCGTGTCCTGTGTCCATGGTACTGGTAGCGGTTGGTTCAGGAA
GACTTAGCTGGATTGTGGAGGCATTCGCCTGGACCGCATGTGTATGCAAG
GCTATTGGTCGCTAAAACATGTCGATAAACTGCTCCAGTAGTACTAACTT
GTGCGTGATTCCGCTTGTCAGTTGACTTGACGTGGTTCTCTGTCCATCTC
GATGCAGAGATACAGTAGATAAATGCTCAACTCTCAAGAAGTCGAGCTCT
CCAATCCTCGTCCTCGGTTGTTGTTCTTGCCATTTCATTTTGACCAACTG
GGCATGCTCATCTCAATTATTTGGAATATGAGCAGAGTGACTAAAAAAGG
AACACGAGTCCAATAGAAAAAGGAACGAAACACAACGACTTAGTAGTATG
TTCAAGGGCAGATGGTCGCTTCCACCTGTTCTGCATAAGGCCGTTGCTGC
TAGCGAGCTCCCACCCTCAATAACTTGGCCAGTGATACGTTGCTGGGCGC
GCACACAGCAGAGGAGGGAACGCGCGCAATGGCGGCAGGCATGGCTAACG
CCGGCGATGGCTCTGCTTCAGCCTACGGCGGGCAGCTGACGTCTTCGGTG
CTCATCACTTGCCTCGTGGCGGCCTCCGGAGGCCTCATCTTCGGCTACGA
CATCGGCATCTCAGGTCAGGTTCACGCATGCACAATCACAACATACGGTC
TGTGCAGAATGTTTGTTTCATTTCTGATCTTTTGCTAGCCTACTACTATG
TCAAGTTCAGGCGGCGTTTCTCAGATGAAACCCTTCTTGGAGACCTTCTT
CCCCAAGGTGCTCAGGAGGATGGCGGAGCCAAAGCGGAACCAGTACTGCA
TCTTCGACAGCCACGCGCTGACATCCTTCACTTCGTCCCTCTACCTCGCC
GGGCTCGTGTCGTCTCTGGCCGCTGGCCGCGTCACCAGGTCGCTGGGCCG
GCGTGGCACGATGCTGGCGGGCGGGGCCCTCTTCTTAGCGGGCGGCGCCA
TGACCGGCGGGGCGGTGAACCTCGCCATGCTCATCGCCGGACGGATGTTG
CTCGGCTTCGGCGTCGGTTTCACCAACCAGGCTACCCCGCTGTACCTCGC
CGAGATGGCTCCCGCGCGGTGGCGCGGCTCACTCACCGTGGCCTTCCAGT
TCTTCCTCTCCCTGGGGATACTCATCGCCAACCTCGTCAACTATGGCACG
GCGCGCCACACGTGGGGCTGGCGGCTCTCCCTCGGCCTCGCCGGCGCGCC
GGCCATCGTCATCCTCGTCGGCGCCTTCTTCCTCACCGACACGCCCAGCA
GCTTCGTCATGCGCGGGAAGGCGGACCTCGCCCGAGCGGCGCTCCTCCGG
GTGCGGGGGCCAGACGCAGACGTGGACGCCGAGCTCAAGGACATCGCGCG
CGCCGTGGAGACCGCGCGCAGCAGCGAGGAAGGCGCGTTCCGGAGGCTCT
TTGCGTGCCGGCAGTACCGGCCGCACCTGACCTTCGCCTTCGTGATGCCG
CTGTGCCACCAGCTCAGCGGCATGATGGTCCTGACCTTCTTCTCGCCGCT
GGTGTTCCGCATCGCCGGCTTCGGGAGCAACGCGGCGCTTATGGGCGCGG
TCATCCTCGCCGCGGTCAAGTTCGGCTCGCTCATCCTCTCCACGCTGGTC
ATCGACCGTTACGGCCGCAAGGTGCTCGTCATGGCCGGCGCGGTCATCAT
GGTCGTTTGCCAGGTAAGCATCTGCTCCACATGGCAGCAGCATCCGATGG
ATCGATATATACGCGCGCGTGTGCTGTTTGATCAACTCGTACTGCTCTTC
ACTTCTTCTTGTTTGAAGGTCGCGATCTCGTGGATCATGGGGGCGCAAGG
CGGAAAGAGCGGCGAGACTCCACTGCCACGGGCGTACGGGCTGGCGCTGC
TGGTGCTCACCTGTGTGCAGGGCGCCGGCTTCGGCATGTCGTGGGCGCCG
CTCATCTGGGTCATCCCCGGGGAGATCTTCCCGCTGGAGATCCGGTCGGC
GGGGCAGTCGGTGAGTGTGTCGGCGACGCTGGGGCTCACGTTCGTGCAGA
CACAGACGTTCCTCGCCCTCCTCTGCAGCCTCAAGTACGCCACATTCGCC
TACTACGCAAGCTGGGTCGTGGCCATGGCGGCTTTCGTCATGGTCTTCCT
GCCGGAGACCAAGGGCGTCCCCCTCGAGTCCATGGGCTCCATCTGGGAGC
GCCACTGGTACTGGAAGCGGTTCGTGGGCGACGGCCACCGCGTCCAAGCA
TCATCTCCATCTGCCTGAACATTCTACCGCACGTTATATTTATCGACATT
CGCTAGATTTCAGAATACTATTTTACTACATAATGTTTTGTTTGGTTTTG
TTTTCTTTCAAAGTCCATCATAATATTTTGTCCGTACAAAACACGAAGAC
TGTACGGTCTGGTTTTGTCGTGTACCAAAAAT

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.