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GrainGenes Sequence Report: BE496873

Sequence	BE496873
Contig	Ta.18203.1.S1_at NSFT03P2_Contig4948
Tracefile	[ Download ] [ View ]
External Databases	Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index	TC356265
wEST map position	BE496873
NCBI UniGene	Ta.55631
DB Remark	Locus Source: Triticum aestivum (bread wheat) UniGene title 'Blue copper-binding protein homolog'
Keyword	EST
Germplasm	Chinese Spring
Species	Triticum aestivum
Cultivar	Chinese Spring
Chromosome	7DS
Clone Library	Wheat heat-stressed seedling cDNA library
Tissue	Leaf
Developmental Stage	Two-week old seedling
Data Source	genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title	WHE0761_C03_F05ZS Wheat heat-stressed seedling cDNA library Triticum aestivum cDNA clone WHE0761_C03_F05, mRNA sequence.
Other Name	WHE0761_C03_F05ZS  [ wEST-mySQL (obsolete) ]
Strain	lab_host E. coli SOLR
DNA Library	TA015E1X
Clone	WHE0761_C03_F05
Remark	DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Two-week old seedling were heat treated at 37 C for 2 hr and cyclic heat treated at 37 C for 2 hr for two days at Texas Tech University (D. Zhang, H. Nguyen lab). The tissue, total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA Homology	Ta.18203.1.S1_at 1120 WHE2AFFY [ Show all 37 ]
DNA	ttcagcagcacctcccttctacctcctctgctttgcattcctccttccgg tttcaaccgcaatcaatggctgccatgaagatcaccctccttgccgtggc cgccttattaggcaccgcgtcagcggtaacctacaacgtcggcgagcagg gcggttggaccctcaacaccgactacagcagctgggtgtccggcaagaag ttcaacgtgggtgatgagatcgtcttcaagtactcgtccgccgcgcacga tgtggtcgaggtcagcaaggccggctacgactcctgcagcatcgacggcg ccatcaacaccttcaaatctggcaacgacgtcatccccctcagcgccacc ggcacccgctacttcatctgcggcatcactggccactgcagccccaccgc cgcggccagcatgaaggtcatgatcgacgtcgcctcgggctcctcttcgc cttcctcacccatgccagccgcaggtcctggcgcgagcaactctcccccg gcgccaccctcctccgccgctacctccgtcggtgccacagcaggatttgg cctcgtcgccctactggcggctggtctcatggcttgaacgcatatattga tcagctgccacgcgcacatatgagcttatata

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