GrainGenes Sequence Report: BE497510
Sequence
BE497510
Contig
Ta.28372.1.S1_a_at NSFT03P2_Contig17669
Tracefile
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External Databases
Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index
TC324143
wEST map position
BE497510
NCBI UniGene
Ta.59893
DB Remark
Locus Source: Triticum aestivum (bread wheat) UniGene title 'Vacuolar ATPase subunit c'
Keyword
EST
Germplasm
Chinese Spring
Species
Triticum aestivum
Cultivar
Chinese Spring
Chromosome
4AL 4BS 4DS 5AS 5BL
Clone Library
Wheat heat-stressed seedling cDNA library
Tissue
Leaf
Developmental Stage
Two-week old seedling
Data Source
genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title
WHE0752_F02_K04ZS Wheat heat-stressed seedling cDNA library Triticum aestivum cDNA clone WHE0752_F02_K04, mRNA sequence.
Other Name
WHE0752_F02_K04ZS [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA015E1X
Clone
WHE0752_F02_K04
Probe
WHE0752_F02_K04
Remark
DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Two-week old seedling were heat treated at 37 C for 2 hr and cyclic heat treated at 37 C for 2 hr for two days at Texas Tech University (D. Zhang, H. Nguyen lab). The tissue, total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA Homology
Ta.28372.1.S1_a_at 672 WHE2AFFY
[ Show all 15 ]
DNA
aggaagaagaggagcaagatgtcgtcggtgttcagcggcgatgagacggc
gcccttcttcggcttcctcggcgccgccgccgcgctcgtcttctcatgca
tgggggcggcctacgggacggccaagagcggggtcggggtggcgtccatg
ggggtcatgcggccagagggggtcatgaagtccatcgtgcccgtcgtcat
ggcgggtgtgctcggaatctacggcctcatcatcgccgtcatcatcagca
ccgggatcaaccccaaggccaagccctacttcctcttcgacggctacgct
cacctctcctccgggctcgcctgtggcctcgcggggctcgccgccggcat
ggccattggcattgtcggtgatgctg
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: BE497510
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||