Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: AA023397

[Submit comment/correction]

Sequence	AA023397
Germplasm	CC7277 (oat)
Species	Avena atlantica
Probe	AA023397
Reference	Maughan PJ et al. (2019) Genomic insights from the first chromosome-scale assemblies of oat (Avena spp.) diploid species BMC Biology 17.
DNA	ATCAGATTCAACTACACAGCCACCCTGCAATCTGCCGCCGCCCGCCGCCC GCCGCCGATACCAGATCAGGATGGAGCCTGATCCGACGCAGACCGACTAC CACTGCCGCCAAAGGGCCTCCCCACCCGCCTAACACGGCTATTGCTGCCG GACGCAACCCGCAGCGCCGCGCCGGCGAGACGACGCGGACCGGGCCGCCG CCCCTGCACTCTAGGTCTGATGCGTGAACAACCACGGCCAGAGGTCCCCG ATCCGGCATCCTGCTCTTCCCGTGAACAGCCGCAGCCATTGGTTAGTTGT GTACTTTCCGCTTCTGCCTCCCTTCAGGAATTCTTTTCCATAAATGTCTA CAAATTCCGATGCAAATCATCGGTAGAGATTAGGAAGGAGCTTGTGACCC ATGTCTGAATAAAATTGTTGCTGAACAGAACAGCGTCATCAGACATCACT ATCTTCAACCTGAAAAATAATTTAATGCGTAATCAGCTCATCCAACCTTC AGTAGGTAGCGTATGATTCCCTAAACTTTGGTTTGTCGTGATTGAAAAAA TGACAAGTATTTGTGTCCCCTTACGTCAATCATCTTCAGTTTGTCTCTTC TTTTCCTGCTCTAGAACTTATCTTCTAGTATGGGGTAGTAATAATTATTA TGTTCCAGTCGTTAATGTACATGGTTTAACAAATTACATTTCTACTCATC AACCTTCTCTGAGTTATTACTGGAAAATAACATATTTGTAACAAACATTA ATAAATCTGAACAAACCGTATAGATGCAAGTTTAGAGAAGCACCAGAATA GACATGGTGGGGCTAGAGTGAGTGGCTCCCAGTAAACAAAACCTGGAAGG CCCTATGCCCCTAACAAATAATAACCAAAAGTACTGTAGTTTCTGTTCCT GAGAGGAAAGTAAACACAAGGTATTAAAGCAAAGTATGAGATGGTAAACA CTCCTTGAGATCTTTGTTTTACCAGCTAAACTAGTACAATATAGAAGACA ATTATTCGGGGTCATATCGTGTATTCTTGAGGAGCACACGATGTTGTATG AAGGAGAAATGGTATATACTTTGACAAACATTTTCTACAGAGTGAAAACA AGAGATTACATTTGGAATATTAGCTGTACATTTATCTTTGTTCTCTTCAA CTAGACCACTTACATATTAAAGAACAAAGAGCAGCGAACCATTCGAAAAA AAAGCTCTACAAGACAATTCTTTTGCAATTTTTTGGGTCCAGAGCTGCAT TTGTTGAACCACTTCAGCTTCCTCTTAACCTCCCATATATGCGTGACGAT CCCTTATTCTATGCAGCTTGGAAGCTACCTCCTCCATGCTGATGCGTTCA CTTGGAGATGACTTGGTGCAGCGAAGGCCAACATCAAGCACAGAAAGTAA ACAATGTACTGCACTGTCATCTGCCACTGGAGCTTCTTGGTGAAGGTACA TCTCTTGTGCCAGTTGTGGATCAACAATCTGCAACATCTTGTCAGGGAAG TTGATCTCTGCAAACTTTGCAATGCTTAATCCATCCTTGAACATGTCATC TGTCGGGCTCCTTCGGATGAATATTTCTAGTAGAATGACCCCAAAGCTGT AAACATCTGCAGCAGTAGAAACTTGACCACCCCCTCCAAATTCTGTAGTT GCACATATCAAGAGATTGATTAAGTTCTCACACTTCCGAGTTAAAAAGGA AGAAGACTATGGTGTTAAAAATTGGAAAATACCTGGAGCAATATATCCTA TGGTTCCCCTTATTGCAATTGAAGAAGCCGATGTCGAGTCACCCAAAGAT GATGATACGGGATAGACTTCCAACCTTGCGAGTCCAAAGTCTCCAACATG AGCTACCATGTCATTATCCAGAAGAATGTTGCTAGGTTTGAGATCGGAAT GAACAATACTTCCTTGGTTGTTATGGTGCAGGTACGCCACTGCATCTGAT ATATCCACCACAAGGCTTAACCTTTGAGCTAGTGATATGTAGCTTAATTT TGAAGAGTTCCCATCGTCTTCAGTAGAGTATAGAAAGTTATGCAAATCCC CTTTTGGCATGAACTCATACACTAGTGCTTTGAAATCATTTCCACTGGAA TCAATGCTAGAACATGCAGTTAAGATGCGGACTAGATTGCAGTGTCGAAC GTTTCTCAAAGCACTGCACTCTGCAATGAAGCTCTTTTGTGCCCCCCTTG TTTCTAAGCAAAATACTTTTATGGCAACCACATTTTTATCTTGAAGTATT TTCCCTCTATACACAGAACTGTATCTTCCCTTGCCAATCAAATTGGATGC TGAGAATCCTTCTGTTGCTCTAGCAAGATCTTTGTAGGAAACTTTTGGGA ATTTGCTATCGAGTGAGAGCAAAGACATATGCATAGATCTCCCCATATAG TTGTTCCTCCATTGAAATAAGGCAAAGATCACCATAGCAAGTGAAAGGAT ACAGGCGAGTGGGATTACTACTTTGAGTACTACAGATAGGCTGTGTTTAG ATGAATTTGAAGAAATAACAGAACATGCAGGCAGGTGTAAGTCCGCTGTC CCACCACAAAGGCCTTGATTTCCATCAATATGTGTGGCAGTTATGTTCTT GAATATTCCATGTATTGGAACCTTACCCTCAAGATGGTTGGAGGAAAAAT CTAGTTGTTCAAGAAGCTGCAGATTCCCAAGAGAATCTGGTATTGGTCCA GTTAGGTTATTGTATGACAAGTTGAGAAGTTTTAAACTAAATAGATTGCC AAATGAAGAGGGGATGCTTCCGTTGAAAATATTATTGTCCAACTCAATGT CTTCCAAACTTTTACAATCGCCCAAAGTGCTGGGGATATATCCAGCTAAC TTGTTGGATGAAAGCAACAAAACCATGAGCTGCTTGGCTTTGCCTACTTC GGCAGAAAGATGCCCATCAAGGTAGTTGGACGATAACCCAATTTGCGCAA TTGTTGGGATTCTGAATATTTCCTCTGGTACCCTACCATGAAGATTATTA TTGGAAAGGCTCAATGTCGCAAGCGATTGAAGCTTTCCCAAGCTTGTTGG TATGTTCCCAGTGAATTTGTTTGTGTCTAGAAGGATTTCTGTTAGTTGAG ATAAGTTGGAAAGAGAGGAAGGAATGTTTCCTTCAAACATGTTGGTGGAC AAGCTTAGCTTTTGCAAATATTTGGAAGCTCCAAGCCACTGTGGTACGAC ACCTGTAAATCGATTGTAATCCAATCCTAGAATGATCAGGTTGGGAAGTT TCGCTATGCCGGAAGGAAAACTCCCTGTCAACTGATTTTGTCCCAAATAT AGATGCTGAAGATGAATGGAAAGGTTACCCAATGAACTTGGCACATGACC TTCTAGACGATTCCCTGCTAATGACAGACCTTGTAGCTCAGTGCAGTTGG CTATGCTACTCAAAAACTCCCACTCTTGTTTGTTGCGTGCTTGGAGTTTA TTCATCTCAATATTGAACTTGACGAGCTTGGACAATCTGCCAATGGAGCT AGGCACAGCCCCAGTAAAATTATTTGTTGATATGTCGAAGACTTGTAGAT TTGACATGTTTACGAATGAAGTTGGAATTGGCCCATGAAAGAAGTTCTCG GCAAATGAGAGTATTTGGACATTAGGTAGAGAGTTACCGAGTTCGGAAGG TAGCTCACCACTTAACATATTGGTATTGAGTCCCAGGCCAATGAGACTAG TAAGATTTACGATGGCTGGTGGGAACCTGCCTACCAACTGATTACTTCCC ACATAAAGAATCTCTAGCCTGTCCAACTTCGCAAGCTCATCAGGGATACT TCCCTCGATTCGATTAAATGCAAAGCTAATCTTCTTCAGCGTTGTGATAT TGGCGAGAGAAGGAGGGATGGTTCCACCAATGTCATTTGATGAAAGTTGC AGCTCTTGAATGTTAGGAGGGAAATCTGCAGGGATTCTCCCAGTCAAACC ATTATTGTTCAGCCACACAACCTTGAGGGCTGAACAGTTTGCAAGGCTGG GGATAATCCCCTGCAGAGTGTTGTTGCTCAAGATGAGCGTCTGGAGTCGA CGAAGGCGGCCGAGGGATGCAGGGATCTGCCCGGCGAGAGTGTTCGTCGG CAGTGCTAGATTTCTCAGGAATGTCAGGTTACCAAGCCAAGGAGAGATTT GCCCAACTAATCCTCGGTTCGCGAGGCGAAGAGATACGACACGACGTGGA TCCTTGGTCCTGCAGGAGACGCCTTCCCAGTCACAGAGGTTGGTGCTCTC GTTCCAGGACGCCAAGGCTTGCTGCGGATCGAGAAGGATGGCCTTCTTGA ATTCGAGCAGGGAAAGCCGGTCTGTTTCGTTCCCTTGGGTGGAGCTGACG ATGGATTGTGCAGCACTGGAAGCTATGAGCAGCAGAAGAAGTTGCAGAAC GATAGTGTCCTTCATTGTCTTGTATAAGCTACTCTGTCGGAATCTCTACA ATTTTCATATGCATAAATAACATGAAATTAATTCAGGCATAGTCAGAAAA CGTTGGAACATCCAATTAACATGATGAATTTTTATCTGTAATTTACCTGA AAATGATTTAGTTTCACTTGCAGCTAAATCTCCCTTTTCATCAAGTTTCT TCAGAAAGCTTCATGCAGAATAACTGGAACACTTGCTATTGTACGTATGT GCGAGACTCATGACTTTTATTCACATCCCTATGTAAAAGAGGTGCTCGAT GATGGATGCAGTTCGTGACGAGAAGCAAAAGAGAAACAGATGCTTGAACA AGTGAAGCTTACTTTGCTTACAGCTGGCTGGTCGACCTCAGCGGCTAGAG ACAAGATGAACGGCCAACCCGGTTTCTGCGGTGGCGCAGTGGAGACTCCG GTGGCGATGGAGCAATAGCCGGCAAAGTGCTGGGCCAGTAAGCAAAACTG ATCGAGGTGAGTGCTGGAGCAAATGCCCGCTTCTTCTCTAGTCTTATGTA GGACTCCATTGCCTCTAGCTAACAGGTAGTCAGTCAAGTCAAGGCAACTT CATTGAAAACACATACTATCATGTGATGGGTACGTTCCTTTCCATGCTAG TTGACTCTATGATCCCTGTAGTTGGTATATTGGAATGTTGAACAATGTTA TCATCCCTTTCCATACGTTCCTTTCCATGCTAGTTGACTTCATTGAAAAC ACATTCGTCATTTTCTTCGAAAGTATGACAGGATTGTCCAGCCGACTGGT CAAAGATTAATAAACAAAAATTAAAGATGCCTTGGCAGCCAAGCCTTAGA GAAGTTTCCACAATGTTATCATCACAACCTTGACTATTTGCAGTAGCTCC TGGGAGTGGATAGTGGGTACACTTGGGCTAGGTTCAGATTATGGTTTCCC AGGCGCCTTCTACTCCTACTGGAAGTACTACTACTCTTTGGTACTAGTAG TACTACTCTTTGGCATTTCGGCACATGGATACTCTTACCCCGATTACTTG GATTTGGACCTCTAATCTTGGTTTCTCCTAAATGATATAGGCTCAACACC GGAGGCGCAGTCTGGAGCCTTCATGTCACCAATATAACTATATCTGCAAC CTCCCTGCTGGAAGATCTCCTTTGCCCTTTTTAGCTTCTTCATTTGGAAG TCTTCACTGTGGCTGCACGGAACATCTCGAGTGAGTCAGAGAAACGCCAA GTTTTTTTTTTCTCCTCACAATGTTAATCCTAGTCTAGGCTCCCAGAAAT TCCAGTACAAAAAGGATCTTTGTTTTCTCGCCTTTAGAATGAAGGAGGAG CTTTCTGCCTTTCTTGGGGCTTGGCTTGTCAATGACAAAAGTAATAAATA ACTTGTGTTCATTTTCATGAAAACAACGTGTATTTCTTTTAACGAAAAGT ATATGTCAAAACGTTTGGTTAGACATGGAATGAGACAATAAATCATTTGG CAGAAAATATATCTGAACTGGCAATCCCAAGATTTGGACAAGTGCCACTG TTGTACACCAAGGCTCATGGCTCACTACAATGCCATCTAGGTCTTTCTTT ACCCACTACTAAAAATGAATCAAACAGGCAAATGCAAAGGATCCGCAGCA ACGCATTGTTGGAAGAACTGGAGTACTAATCATTATCTTGGCTGGTGTGG TGTGAGTGCTGGAGCAGATGCCCGTTTCTTCTCTGGTCTTTTGTAGGACT CCATTGTCTCTAGCTAATTGGTAGTCAAGTCAAGGCAGCTTCATTGAAAA CACATTCTATCCTGTGATGGGTACGTTCCTTTCCATCCTAGTTGACTCAA TGTTCGTCATCACTTGCAAAATTGATCCATGCCTGTGGTTGTTGGTATGA CTCCACCTTCTGTCATTTTCTTCGAAAGTATGGCCGGCCGGATTGTCAAG GGATCATGCATAGGAAATGAAAGATGCCTTGGCTAAGTTTCCACAATATT ATCATAAACAACCTTGGCTCGGTTACCACGGTATACTGCTCCCTCCGTTT CAAAATATAAGATGTTTTAGCTTTGTGGAGCTAATTAATCTAGACCCCTT TTAGTGTGTAGGTTCATTTCGAACCTCTCCAAACCTACCTACTAAAATAG GTCTAGATACATTAGCTTCACAAAACTAAAACATCTTATATTTTAAAACG GAGGGAGTATAAATATAACCTTGAGTATTTGCAGTGACTTCTGGGAGTGA ACTTGGAATGGAGGCGATGCCTGGAGATCTCCTTCCACATGGCCCTTGTT CGCTTCTTCATGGAAGTCTTCATTGTTCTGCACAGAGCATCTTCGGTCAG AGAAAAGCCATGTTTTCTCCCTCTTCACAATGTTAACCCTAGTAAAATTC CAGTACAAAAAGGATCTTTATTTTGGCTTGCTCTTGATATTCGGTTGGTG CAGAGGCCGGGTGCATTTGATATCATATTGATATTAGCATATTGTCCTTT ATCGGAACAAAAAAAATGAAGGAAGGAGCTTTCTGCCAGTCTCATGGCTT GACTTGTTAGTGAAAAATGTAAATGACTTGTTTTATTTGAATGAAAATAA CTTTTGTTTGTTTTGATGAAAAATGTACATCAAACCGTTTGGGTAAACAT GGTATGGGACTATAAATCATTTTGTCAAAAAAATATCTGAATTGGCAGAC TAGTGTATTTTCCTAGTTTTGAACAAGGGCCTCTTTTGTACACCGGTTTC CACAAGGCTCATCATGTATCGCAACAAAACAGATCCTGAGAATACAGTAC CTACTAGTAGTATACAGAGTCAAAGGAGCAAAAAAAGAAGGCCCTAAGCC AGTGGCACGCCGTCCACGGCACCGCATGTGGCATCCTGGTGGTCAGCGTC GCACACCGTTGGAAGACCTGGAATGCTGGTCATTTTCTTCGCCAGTATAA GCTCGAAGAGACGAACGATGCCTTGGGCTTGGCTCCAATTCCACATATTG TCAGCGACTCTTGGCAGTACATTTAGGGCCACGGGGATACATGATTCGGC ACCTCCAAGACTATTGGTCTGCACTTTGGAACCATATAGAGGTTATGAAT TTCCTGGCGTCTCCTACTCCTACAGGAAGTACGTACAACTCTTTGGCTTC TTAGCGCACTACTTCTTAGGTGCACCTGGATCTAGACCTCTGTGTTAGCC TTTGCTTGGCTTCTCTTGAATTATATAGGCTCAACACCAATGACTACATT TGCAATCTCTGCCACTTTAGTGCTGGAAGATCTCTTTCCACATGGCAAAT ATCTCAGAGCCGGAGAAACGCCCAAGTTTATTTTCACCATGTTCATCCTT GTAGGCTTGTGGAAAATTCAGTACAAAAAAAGATACTCACTCGGGTCCAT ATTAATGGCCTCAATTAATATGGACCGGAGGAAGTATCTATATTCCCTCC TTTTATTTAGAATGAAGAAGGTTTTCTTCTAATAAGCGTCAAGGCTTGGC ACTTGAATCATCCTCATAATGTGCTTTACCAGTTTCTAAACAACTTTTGT TTCTTTTAATAGAAAAATGTACTTCCAGGGTCTTGCCTGCAGCTTGAACT GGCAAAAGATCTACTCCTACTTCAATTGATAGACCTCAGCGGCTAGAGAC AAGATGAAACGACCAACCCGGTTTCGGCGGCAGCGTAGTGGAGACTCCGG TGGCGATGGAGCAATAGCCGGCAAAGTGCTGGGCCAGTAAGCAAAACTGA TCGAGGTGAGTGCTGGAGCAAATGCCCGCTTCTTCTCTAGTCTTTTGTAG GCCTCTATTGTCTCTAGCTAATAGGTATTCAGTCAAGTCAAGGCAACTCT TCATTGAAAACACATTCTATCCTCTGATGCGTATGTTTCTTTCCATGCTA GTTGACTCTATGATCGTCGTCACTTGCCTGTATCTACATGGTGTAGTTGT TGGAATACTGGAATGCTGAACATAACTCCGCATTCGTCATTTTCTTCGAA AGTATGACCGGTCAAAGGCTAATAAAAAAATGAAAGATGCCTTGGTATCC TGTGATGTGTATGTTCCTTTCCATATATCCATGCTGTTGTGGTTGTTGGT ATACGGGAATGGTGAACATGACTCCGCGTTCTTCATTTTCTTCGAAAGTA AAACCGGCCGCATTTGTCAAGGGCTCATGCATAGAAAAAGAAAGATGCCT TGGCAGCCAATCCTTGGCTGGGTTCCCACAATATTATCATCACAACCTTG GCTCGGTTTCCACATTATACTATGGATATAACCTTGACTATTTGCAGTGA CTTCTGGGAGTGAACTTGGAACTGAGGCAATGCCTGGAGATCTCCTTCCA CATGGCTCTTGTTGGCTTTTTCATGGAAGTTTTCATTGTGGCTGCACAGA GCATCTTCAGTCAGAGAAAAGCCATGTTTTCTCTCTCTTCGCAATGTTAA CCCTAGTAAAATTCCAGTACCACAATTGCTCTTGATATTGGGTTGATGCA GAGGCCGGGTGCATCTGATATCTTATTGATATTTGTATATTCTCCTTTAC CG

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.