GrainGenes Sequence Report: NSFT03P2_Contig16848
Sequence
BE498656
Contig
Ta.9107.1.S1_x_at Ta.9107.2.S1_a_at NSFT03P2_Contig16848
Tracefile
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External Databases
Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index
TC277830
wEST map position
BE498656
NCBI UniGene
Ta.9107
DB Remark
Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, strongly similar to NP_001063330.1 Os09g0451400 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Germplasm
Chinese Spring
Species
Triticum aestivum
Cultivar
Chinese Spring
Chromosome
5AL 5BL 6AL 6BL 6DL
Clone Library
Wheat pre-anthesis spike cDNA library
Tissue
Spike before anthesis
Developmental Stage
Adult plant
Data Source
genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title
WHE0964_D03_G06ZS Wheat pre-anthesis spike cDNA library Triticum aestivum cDNA clone WHE0964_D03_G06, mRNA sequence.
Other Name
WHE0964_D03_G06ZS [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA019E1X
Clone
WHE0964_D03_G06
Probe
WHE0964_D03_G06
Remark
DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown in the greenhouse. Whole spike with awns trimmed, white, green and yellow anther were collected and total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA Homology
Ta.9107.1.S1_x_at 1019 WHE2AFFY
[ Show all 12 ]
DNA
ccgtggcgatggacctgctgcatgacgcatgcgtgaactggggattcttc
caggttctggaccacggcatctcaacggagctgatggacgaggtggagaa
gatgaccaaggagcactacaagagggtgcgcgagcagaggttcctcgagt
tcgccagcaagacgctggagggcggcggcagggcggcggagaacctggac
tgggagagcaccttcttcgtgcgccacctcccggaggccaacatcgccga
gatacccgacctcgacgacgactacaggcgggtgatgaagcagttcgcgg
cggagctggagaggctggcggagcggctgctggacctgctctgcgagaac
ctcggcctggagaaggggtacctcacgcgggcgttccggggctccaaggg
cgtccccaccttcggcaccaaggtcagcagctacccgccgtgcccgcgcc
cggacctcgtcaagggcctccgcgcgcacaccgacgccggcggcatcatc
ctgctcttccaggacgactgcgtcggcgggctccagctcctcaaggacgg
cgagtgggtggacgtgccgcccacgcgccactccatcgtcgtc
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: NSFT03P2_Contig16848
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||