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GrainGenes Sequence Report: BE518223

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Sequence
BE518223
Tracefile
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External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
wEST map position
BE518223
DB Remark
Locus Source: Triticum aestivum (bread wheat)
Keyword
EST
Germplasm
Chinese Spring
Species
Triticum aestivum
Cultivar
Chinese Spring
Chromosome
1AS
1BS
Clone Library
Wheat vernalized crown cDNA library
Tissue
Crown tissue of seedling
Developmental Stage
Five-week old seedling
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0807_F11_L20ZS Wheat vernalized crown cDNA library Triticum aestivum cDNA clone WHE0807_F11_L20, mRNA sequence.
Other Name
WHE0807_F11_L20ZS  [ wEST-mySQL (obsolete) ]
Strain
lab_host E. coli SOLR
DNA Library
TA016E1X
Clone
WHE0807_F11_L20
Probe
BE518223
WHE0807_F11_L20
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer.
Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Seeds were germinated and grown at 4 C for 5 weeks. The tissue, total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA Homology
Ta.25549.1.S1_at410WHE2AFFY
Ta.30657.1.S1_at58WHE2AFFY
Ta.30657.1.A1_at58WHE2AFFY
DNA
ctccaaggatgccgtgttatgatcacaacacggaaggaagatgttgcggc
tcttgctccagtgaggcaccgcctactattgcagccattgggtagcgttg
aatctttcaagctattctgctctagggctttccacaacagcctgggccgc
aagtgcccttcagagctcgaggaggtggcggctgctatagttgaccggtg
tcgtggcctgccattggccattgtatcgtctggcagcctattgtccacaa
agcaaccaacagagcacgcctggaatcaggtgtacaaccatctccggagc
gagctgcgggggaataaccatgtccaggctatacttaatctgagctacca
tgacttgcctggtgatctcaggaactgcttcctgtactgtagcttgttcc
gtgaagactatgaaatgtcacgggagaaccttgtgcggttgtgggttgct
g

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