Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Sequence Report: Ta.1335.2.S1_at

Sequence	BE606291
Contig	Ta.1335.2.S1_at Ta.1335.2.S1_x_at NSFT03P2_Contig16814
Tracefile	[ Download ] [ View ]
External Databases	Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index	TC288108
NCBI UniGene	Ta.54503
DB Remark	Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, strongly similar to XP_001690993.1 ribosomal protein S23, component of cytosolic 80S ribosome and 40S small subunit [Chlamydomonas reinhardtii]'
Keyword	EST
Germplasm	Chinese Spring
Species	Triticum aestivum
Cultivar	Chinese Spring
Clone Library	Wheat 5-15 DAP spike cDNA library
Tissue	Spike
Developmental Stage	Adult plant
Data Source	genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title	WHE0905_F06_K11ZS Wheat 5-15 DAP spike cDNA library Triticum aestivum cDNA clone WHE0905_F06_K11, mRNA sequence.
Other Name	WHE0905_F06_K11ZS  [ wEST-mySQL (obsolete) ]
Strain	lab_host E. coli SOLR
DNA Library	TA018E1X
Clone	WHE0905_F06_K11
Probe	[Wcl119ct564cn901] BE606291
Remark	DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown in the greenhouse. Spikes at 5, 10 and 15 DAP were harvested, total RNA and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors ). Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown in the greenhouse. Spikes at 5, 10 and 15 DAP were harvested, total RNA and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA	gccgccgccgccgctccgagctcgcgccccctagcccagccgccgccgcc gccgccgcctcgtcggagttcttcccacccctttcgccaacatgggtaag acacgtggtatgggagctgggcgcaagctcaagacccaccgcaggaacca gaggtgggctgacaaggcatacaagaagagccacttgggtaacgagtgga agaaacccttcgccgggtcatctcacgccaagggcattgttttggagaag attggtattgaggccaagcagcctaactctgccatccgtaagtgtgctcg tgtgcagcttgtgaagaatggaaagaagattgccgccttcgttcccaatg atggttgcctgaacttcatcgaggagaatgacgaggtgctgatcgctgga ttcggtcgtaagggacatgctgtgggagatattcccggtgtc

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.