GrainGenes Sequence Report: AJ132578
Sequence
AJ132578
Subsequence
AJ132578_1.cds 117 5678 AJ132578_2.cds 117 4154 AJ132578_3.cds 5730 6704
External Databases
Data at GenBank Data at EMBL Data at DDBJ
DB Remark
Locus Source: Oat golden stripe virus
Keyword
complete genome
[ Show all 7 ]
Species
Oat golden stripe virus
Data Source
genbank Downloaded 2008-2009
Title
Oat golden stripe virus RNA1 complete genome.
Gene
ORF1 readthrough ORF1 ORF3
Remark
DB_xref: taxon:45103 Feature: source: mol_type = 'genomic RNA'; segment = 'RNA1'; country = 'United Kingdom' Specific_host: Avena sativa (oat)
EMBL Feature
feature_gene 117 5678 Location: 117..5678 feature_gene 117 5678 Location: 117..4154 feature_gene 117 4154 Location: 117..5678 feature_gene 117 4154 Location: 117..4154 feature_gene 5730 6704 Location: 5730..6704
DNA
gtatttcaaattttcttctagtcgttagactgatataagaaagaattggg
atactgtgttattcacgaaagtaaggcacgctacggcgataaatccttgt
ttttgcgtttgacaaaatgcctatcgatagcagcactatactgggtatta
tcaatgaagaggaggtggtgagagcggcgatagccacgagcgccacacgt
accaactctgaattacacaggactgtttgtgagcacattcgcgggcagtt
cttagacaccgtggaaaaccaaaaaacaaaaaaaaaaatagatgttagga
gggacttgacgcaggagcaattgcagttgttgaatgatttgtatcctgag
aggcacattgttactagcaactgcgagcgtggcactcatagttttgcggc
agcctccagaaagattgagacagatttgatattgagtcgtatccccaaga
acgccaacgtttatgatattggtggtaattgggccacgcacttgaaaaga
aaagacctgaggaaggtacactgctgttgtccgatattagacttccgcga
tgctcagaggaagaccactagatggttatctgtggagaagtttataactg
atcggaatgagttgatgccggaggttggtgaaaagcttaaggagatacaa
gaagatgagaacttcattagcggcaacctgaggaaagggttggtggaacc
gaagttcttgactggtaagtggtactgtgagaataagtttgaggattgtg
tttttaaggctgaaaaggcttatgccatggctatccatagcatatacgat
attgctctggatgatcttgcgaatgcgatggaagagaaacgaattaagta
cttgatgggtacgtttctattttcggttgacatgttgatcggaaagaaga
ggggtgaaatgacgactgttgatggtttttacgaaatcgatggggaagac
gtgaagtacggtttctatgatgatacaaactgcggttacaagcacaatat
gcagcaacttatggaatacttgaccaggacttttgtgaaggcgaaggctg
gttcagtgtactatctggagttgacggaacagagaggagatgtcatgttt
ttctccatgacggatgcgacggaagctaggatgcatggtgtggcgcagga
tgaatcatttaaatgtataccgattgattccaaagacaatgtcgtttttc
ccttgttcgaattggacaagcgcactgacgtgcttgtgttttcggaaata
atactgtccaggacgtttgtgagaagagcggtggagtacacggcaagact
gaagcctaatcagctgaatgcagagacggttaatagctatttgacctcga
ccaataatactgtgattattggtggctctgccaagaaaacggttgagaaa
gtagatgcgctgctgattcagcaaattaccactacactgattgtatggac
tgagttgatgaatgcccgacagaagagagtgttgacgcaattaagactgc
aaatgaaggacgatgtgaatttctcatcgcttgcccaggcggcctttcac
aaggtttttgggaaagtgagtacatatcagaaggcgctgagagtttttgc
taggtggatttcttactgtcacggatcagacgctatagagttcagaaatg
tgcccttgtacgtcgagattacggatagagtgaaattatggaagcaacac
gcgcccaatcatggtttctcctttgacttggagggtttggatgccaagat
tgagctgcacaaggagctggagagagagagaaaagcaattagtgagtatg
tggcttcggacaaacttggtgagttgtgtcctaaggaagtcgacgcggga
agtgtcactgaagttagggaataccaggacggacgaaggagagcgactgc
tagcgatcttaaatccggtgaggttttcactaattttgttgacgattggt
gtaataaggaagatcattttaatcacaggcatacggacgctgagcacaag
tattccgctatggtggcgatgctaaaatctatatgggaggtgtttgtacc
ttctatgcagttcgcacctgtttatgttgatgttgatgcgaagcttgact
cggtagcggacgatgtcgtcgtttccgacggaagtgatgacgatgatgat
gatgcacctacggcgccagaggttgtggaagttacagttgaaaaggaaaa
tgcggaagtgctgcctgcggttgtggatagagccgcagtgtggagggact
atacagaggcgttgctgaaagggaagaatgtgactcttcctttagaggtt
ttgaggacacccgtccccactgcacttgagaacacggaactgtgtgtcag
atcaaatgggaaagaggtccttgtggttcctgttttgaggacaccagccc
ccactgcacctgagagcgtggagtcatgtgttagatcgaaagggaaagaa
gtccttgtggttcctgcagaagtaccacttagaggtagttcgtcacgttc
tagcgaaagtgaggtgcgcactgagcatgaattgttggaggtggatatgc
gggtgctcgctgccgtgacggaagctttagacgaaatggagaaatcgttg
aaagtggtggtgccggaaacgccttgcaaaccgttgtacgtctccgacat
taccgattcagacgatgatagtgaaccaggttccaaaccttggggtttgc
tggcagaggaagagagtgatgattcgttttatatcaattcagagctgatc
tctaactctgtgaagaaaggggtattgcctaagcagcctgacttcaggaa
gtttcccactgtgcagcagaaagcaaagcatgagttcatgtggtacttgc
gctgcaagataacatcagatcgcacgacacttagaagtatcattgacgat
cacttgagaggggtctttcacaacggtaattgtgagctgcctagtgactc
gtgttttttagactacacaagcaacaatggaggcgaatgggtgtatggaa
aaccatccagagttggtcattgttacggtgtgggtttttcgctgagttcg
gcagggaaagttatcaagtgtgaattgatgaaactgatatgggatgtcga
tgagcggggtaacccttcgcaaaagcctttcaatacgaagacagtgcagt
acatgctgttgagtgacataacatttttgatgaatgagatgttgattttt
aggaacctgcaggcttctttgttgcggaaggacaggacgaaacaggctgt
tatcatgttaaaggatggcgtacccggatgtggaaaatccacctggatct
taaacaatgcaaatcatgtgaaagacgttgtactttctatgggaagagag
gcgactctcgatctgaaggataaatttgcgagaaagtataagtgtcagga
aagagagctgaagagaatacgtactgtggattcttatttaatgcatgact
gcggaaagacgcttagggccagcgtcgtgcattttgatgaggcactgatg
gcacatgctgggatggtgtacttctgcgctgatctgttgggtgcgaagaa
ggttatctgtcaaggtgattcacagcagattccctttgtgaacagggtcg
aatctatatcacttcagtatgctaaattggttatagatcggactgaaagt
gtgcggatgacgtacagatctcctatcgacgtcgcgcactacttgaatgc
taaggcttattatgatggtggaagggtgacgacaaagaatgaagttttga
gatctatgtcggttgtcggacctagaggcacgaggcctatgaattctgca
tattgcgttccttatgttaaggatacgcaatacttgacgtttacccaagc
tgagaaggatgacttatttaaggcgttgaggtctaaaggctctgtgagtg
ttaatactgtgcatgaagctcagggaaaaactttcgacaatgtaatttta
gtgcgtttgaaaaccacggaaaatcccatatatccagggggactgaagtc
gaagccttatactattgtttctgtgacgcggcatcgtcgttctttagtct
actacaccgctgtggaggataggttgtttttcgatattggcgagatgaaa
agtgtgatggaagacaaactgatgaagaatttgaatctcgagaatcagaa
atgacggtttgggtcgaaatacgaaactatcttaatatgtgatagagaag
tgaaggttccggacacaggagatcttgtaatgattcaagatttttacgat
cgagtgtttccgggaaattctacgatggaatcgtatttcgacgggtatga
ggtagcaactggtgacatttctattgaagttgaaaactgtactgtgcaac
ctcacaagaatgttagggtttggcaagaaaaatctggtttggtgcctgtt
ttacggactgcgatgcctgagaagcgacaaaatggtatgatcgaatcgtt
actcgcgttaaagaaaagaaacatggctgcatctaagttacaggaagcgg
taaacgagtttgaacttattgagaggactattgacagagcaaagaagatt
ttcttaaatgaagatatgatcgattgttcggccacttctactatggaatc
taatatgcgttggtgggaaaaacagtcgcacacagctaggcagcaattac
tgaaagagactaagcttatacatgagattgatgtttgtacttacaacttc
atgattaagaatgacgtgaagcctaagatggacactacgccgcaatctga
gtatgctgcgttgcagactgtggtttacccggataagattgttaatgctc
tttttgggccggtaatgaaggagataaatgagcgcattcggtacgcgctg
aagccacatgtagtttacaactctagaatgaatgcagatgagttaaatcg
gacggttgaatttctggatccggacgaggatttacaatcttttgagatag
atttctcgaaattcgacaagtcaaagacttcacttcatattcgtgctgtg
atagagttttataagctttttggcttggaggagatgttggcttttctgtg
ggagaagtcgcaatgtcagaccactgtgaaggatagattgaacggtataa
cagcttacttgttgtatcaacaaaaatctggcaattgtgatacttatggt
tcaaacacttggtcggctgccttggctctgctggagactatgcctttgga
gcacgccaagtttatgatctttggaggtgatgattcgcttttgctgtttc
ccaagaagatctgtgtagaggatccctgtaggagattggcttcgctctgg
aactttgactgcaaactttttgattttaagtacaatatgttttgcggtaa
gttcttgctgaaagttggtgataaatggaaattcgctccggatcctatga
aactgatcacaaaattggggcggaaagatatagttgatggtgagctcttg
tctgagatttttgtctctattggagacaattacagaagttaccgtgacta
tagaattttggagggtttgggacctgctttgcaggagcggtatagaacaa
ctgaagatcctacgcccgctttgattgcgttaaagaaatatgtctttaac
tttagtttgttcgctagtgcgtttaattataatggtaagtttgtggtgaa
gaaagtgagtagagattttgactggtagtcgagtctctcgttgtttttgt
tcttacctcctactatatttagctgcactatgtcgactaagaatatttca
aaagatgtcactggttctagttacgctgaagtgtacaatggtatgttgga
tgctatggctgagaaaaatcctgatgatgagtcactggttacgaataggc
aacgtagtttcaatgttgtgaacaaatacgttgagaaagcactggtccaa
gacaaggcaatcacgaaaatgcgtgccctatggacggaattcactgatcg
taatggcgaaaaaggaacaccgtataatatgacttatagttgtgttcttt
taaatataattccgactgttcctaagggttatcctggtactgttgtggtg
aagttgatagactctggattgtctttattggacaatgtgatacctgatca
atctcaaatgatggagttgggtatgggcccttgtgttatgtgtttcttca
cgaactacagcataccgatcaacgatgttggaagagcggtgaacttggct
ttccaaattgatgctgaaatggcgagcaagcatatgagtgtgatgaacgt
atatgcatactggcatgtgaaaagcaattttctctcgtcttatcctgaac
cgcagaagtctaccgtatcccaattaattttgggttacgataaatctctt
acgttaaagacgcggggtgatgttcgtcgttttgtggggaggtctttgaa
tttggcatcgttggttcctaaggttcctgatcttttgcctgctcacataa
atgtaaacaaggaaaatgttcctctactgcgaaaagaggaatttatcgac
ttgacaaaggcagaacgacagaaagacaaagatctggctgacttgaagga
aaggagtaaaatcagtcaggctagaaatgctgctgaaatgaggcgtcgag
cttcgagtctctcggctgctgaagcggagaagactgctgctgccgatgtt
gcagcgaagctaaaggcgaagaacgcacctgatatatcttttggaaattt
ttagtttctttttatatacagtttctaaaaacccaaaaatattttgcttt
gtggttgtttaaggctgttgaggtggtttatcgtggctcagacgatactg
agtagtgctttccagttcacttaaatagaactggttgggcgtatttcata
cgcgatgagtgttagactccgaaaaatctaacgcggtctttgcgataaaa
gacagtgcttgataattcacttaaatcgaattatcgtgttggcgcttcac
ggtgcgttcaaaccgtgagctttcctctagtttttattgatgtgatttta
aaaaaatcaatatttgactatgatgaggagcgattaggagtcgcggttgc
tatgacacagcaactaagaggggtgcaaatccccccccgaaccggagggt
tatccggccca
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: AJ132578
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||