GrainGenes Sequence Report: AJ295226
Sequence
AJ295226
Subsequence
AJ295226_1.cds 129 1220
External Databases
Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index
TC158085
DB Remark
Locus Source: Hordeum vulgare subsp. vulgare
Keyword
gag-protease fusion polyprotein pseudogene
Species
Hordeum vulgare subsp. vulgare
Cultivar
Bomi
Data Source
genbank Release 135, Apr 15 2003
Title
Hordeum vulgare retrotransposon BARE-1 partial pseudogene for gag-protease fusion polyprotein precursor.
Gene Product
protease gag protein
Remark
DB_xref: taxon:112509 Feature: repeat_region: transposon = 'BARE-1 retroelement gg9' Feature: source: mol_type = 'genomic DNA';
EMBL Feature
mat_peptide 129 968 Location: 129..968 mat_peptide 969 1220 BARE-1 inactive due to inframe stop at 1179 Location: 969..1220 repeat_region 129 1220 Location: 129..1220
DNA
atcatgcgacacacgagtaactagaggggtgtctatttgagtgggagttt
attagtaatatgattatctaaactcaattatcttgatcatagtctaagta
atctttgcaaaatatatgttgtagattaatggctcgcggagtagcaaccc
tgaattttaatacattcctagagaaagctaagttcaaagatgatggaagc
aacttcgttgactgggctcataatctgaagcttatcctcactgctggcca
taggaattatgtccttgatgctgcactagaagatgaaccacccgctacgg
ctgatcaggatgttaagagcgcttggttagcacgtaaggaggactactca
gtagttcaatgtgcagtcttgtatggcttagaaccgggacttcaacgtcg
ctttgagcgtcatggagcatttgagatgttccaggagttgaagtttatct
tacagaagaacgcccggatcgagaggtatgagacctccgataaattctat
gctcgcaagatggaggagaactcgtctgtcagtgaacatgtgctcaaaat
gtctgggtactcaaaccatctagctgagctggggattgaactcccgcaag
aggctatcactgatagaatccttcaatcacttccgccaagctataaaggc
tttgtgttgaactacaacatgcaaggggtgaacaaagcacccggcgagtt
gtttgcgatgctgaaagtcgcagagtctgaactccgtaaagaacatcaag
tgttgatggtgaataagaccactagtttcaagagaaacggcaaaggcaag
aagggtaattcaaagaagagcggcaagcctgttgccaatccgacgaagaa
acccaaagctggacctaagcctgaaacaaagtgttactattgcaagggta
tgggtcactggaagcgcaattgccccaagtatctggcagataagaaggcg
gccaaagaaaaatcaggtatatttgatatacatgtcattgatgtgtactt
aaccggctctcgtagtagtgcctcggtattcgataccggttctattgctc
atatttgcaactcgaaacaggaactgcggaatagacgaaggctggcgaaa
gatgaagtgacgatgcgcgtaggaaatggttccaaggttgatgcaatcgc
cgtcggcacagtttcacttcagttaccatagggattagttacgaacttaa
atcattgttacttagtgcct
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: AJ295226
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||