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GrainGenes Sequence Report: BF472973

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Sequence	BF472973
Contig	NSFT03P2_Contig18159
Tracefile	[ Download ] [ View ]
External Databases	Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index	TC286278
NCBI UniGene	Ta.55061
DB Remark	Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, weakly similar to XP_901600.1 PREDICTED: hypothetical protein LOC71386 [Mus musculus]'
Keyword	EST
Germplasm	Chinese Spring
Species	Triticum aestivum
Cultivar	Chinese Spring
Clone Library	Wheat 5-15 DAP spike cDNA library
Tissue	Spike
Developmental Stage	Adult plant
Data Source	genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title	WHE0925_F12_K23ZS Wheat 5-15 DAP spike cDNA library Triticum aestivum cDNA clone WHE0925_F12_K23, mRNA sequence.
Other Name	WHE0925_F12_K23ZS  [ wEST-mySQL (obsolete) ]
Strain	lab_host E. coli SOLR
DNA Library	TA018E1X
Clone	WHE0925_F12_K23
Probe	BF472973
Remark	DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown in the greenhouse. Spikes at 5, 10 and 15 DAP were harvested, total RNA and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors ). Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown in the greenhouse. Spikes at 5, 10 and 15 DAP were harvested, total RNA and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA	acaacaaccatatccgcagccgctctatttccaagccgcaaccttttccg ccacaacttccatatccgcagccgcaaccatttcccccacaacaaccata tccacaaccgcaaacacagcatctgcaaccacaacaaccaatttcgcagc aacaagcacaacaacaacaacaacaacaacaacaacaacaaatccttcaa caaattctgcaacaacaacaactgattccatgcagggatgtcatcgtctt gcaacaacacaacatagcgcatgaaagctcacaagtattgcagcaaagta gttaccaagtgttgcaacaattatgttgtcagcagctgcggcagatcccc gagcagtcgcggtgccaagccatcaacaatgtcgttcatgctattattct gcatcaacaacaacaacaacaaggacaacatcaacagtcgagccaggtct cctaccagcagcctcagcaacaatatccatcaggccagggctccttccag ccatctcagcaaaatccacaggcccagggctttgtccaacctcaacatct gccccaactcgaggaaataagtaacctagcgctgcagacgctaccagcaa tgtgcaatgtctacatccctccatattgctcgaccaccattgcgccattt ggcatct

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