GrainGenes Sequence Report: BG608232
Sequence
BG608232
Contig
Ta.28127.1.S1_at Ta.28127.2.S1_a_at NSFT03P2_Contig2759
External Databases
Data at GenBank Data at EMBL Data at DDBJ
wEST map position
BG608232
DB Remark
Locus Source: Triticum monococcum
Keyword
EST
Species
Triticum monococcum
Cultivar
DV92
Chromosome
2AL 2BL 2DL
Clone Library
Triticum monococcum early reproductive apex cDNA library
Tissue
Early reproductive apex
Developmental Stage
Seven week-old plants
Data Source
genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title
WHE2468_E12_I24ZS Triticum monococcum early reproductive apex cDNA library Triticum monococcum cDNA clone WHE2468_E12_I24, mRNA sequence.
Strain
lab_host E. coli XLOLR
Clone
WHE2468_E12_I24
Remark
DB_xref: taxon:4568 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; Sequence have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20; Seq primer: Stratagene SK primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; The tissue, total RNA, and poly(A) RNA were prepared from apex at double-ridge stage to terminal-spikelet stage during transition from vegetative state to flower state, a cDNA library was made, and the cDNA clones were in vivo excised at the University of California, Davis (V. Echenique, B. Stamova , J. Dubcovsky). Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors). Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; The tissue, total RNA, and poly(A) RNA were prepared from apex at double-ridge stage to terminal-spikelet stage during transition from vegetative state to flower state, a cDNA library was made, and the cDNA clones were in vivo excised at the University of California, Davis (V. Echenique, B. Stamova, J. Dubcovsky). Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA Homology
Ta.28127.1.S1_at 486 WHE2AFFY
[ Show all 9 ]
DNA
gtgcctctggaaccgtgactacgctggtatctatacttccgcacagggtt
cgagtgggggcctgaaatcgcggattttgtgtccgccttcctagaaagct
acagaaagaagatatttgagctgttgacttctgcatataccacaatcagc
attgcggatgtggctcacttcatggggatgagcgatgaggatgctactaa
ggggccgtgcaaaaccgttggagtctggatgtggcaaccaagatgcttac
tgtcanaaaacacaagccccagacgaaccagaagcttgatccaagcaaac
tacagcgtttgactgaatgtgttttccacctggagcactgatgccctcgg
ttcctggcagcccctcgtgtttttctgcttttaaggcacctattaatcgt
acatggtggtaacttaatactgtatggc
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: BG608232
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||