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GrainGenes Sequence Report: BI780900

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Sequence
BI780900
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC172912
NCBI UniGene
Hv.18667
DB Remark
Locus Source: Hordeum vulgare subsp. vulgare
UniGene title 'Transcribed locus, strongly similar to NP_001049134.1 Os03g0175600 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Hordeum vulgare subsp. vulgare
Cultivar
Optic
Clone Library
maternal, 12 DPA, no treatment, cv Optic, EBma05
Tissue
maternal
Developmental Stage
12 DPA
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
EBma05_SQ001_G15_R maternal, 12 DPA, no treatment, cv Optic, EBma05 Hordeum vulgare subsp. vulgare cDNA clone EBma05_SQ001_G15 5', mRNA sequence.
Strain
lab_host DH10B
vulgare
Clone
EBma05_SQ001_G15
Probe
bast55E0709
Remark
DB_xref: taxon:112509
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Waugh R, Marshall DF; Genome Dynamics/Computational Biology; Scottish Crop Research Institute; Invergowrie, Dundee, DD2 5DA, Scotland, UK; Tel: 00 44 1382 562731; Fax: 00 44 1382 562426; Email: est@scri.sari.ac.uk; All sequence has a Phred quality score of 20 or over; Seq primer: M13 reverse.
Note: Vector: pSPORT1; Site_1: Sal I; Site_2: Not I; Non-normalised library, directionally cloned into pSPORT1. Derived from maternal tissue dissected from developing grains (12 days post anthesis) in glasshouse grown barley plants. Developed as part of the barley transcriptome resources of BBSRC/SEERAD funded cereal IGF (Investigating Gene Function) project.
DNA
ctataggagcagagattgactattcattgattgagcagaggcggcaattc
cttcctctgcgacaccaacgacgtggagatctttatcagctggtagacgt
ccagggatcgggttccaagtagactgtcctcattgctcgcgccggcgtga
tccgtgaaagcaacagccgccgattgggaaggcaagctcaagctttcgga
tcgcgagatgatgagataatgtgcgagaaggggacagaaccaaataagga
gatactgtatgtaacatgtataactgcctgagttgcgaaataattgaacc
gcattggcaggaacaaaaatcgataaatgtcactcaacctgttggggtta
cttgtgctatgtttgagatgaagcaaacatggcatgattacttcatcca

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