GrainGenes Sequence Report: BQ160601
Sequence
BQ160601
Contig
NSFT03P2_Contig14454
External Databases
Data at GenBank Data at EMBL Data at DDBJ
wEST map position
BQ160601
DB Remark
Locus Source: Secale cereale (rye)
Keyword
EST
Species
Secale cereale
Cultivar
Blanco
Chromosome
1AS 1BS 1DS
Clone Library
Secale cereale anther cDNA library
Tissue
Anther
Developmental Stage
Adult plant before anthesis
Data Source
genbank Release 135, Apr 15 2003 genbank Downloaded 2008-2009
Title
WHE1841-1844_D05_D05ZT Secale cereale anther cDNA library Secale cereale cDNA clone WHE1841-1844_D05_D05, mRNA sequence.
Strain
lab_host E. coli SOLR
Clone
WHE1841-1844_D05_D05
Probe
WHE1841-1844_D05_D05
Remark
DB_xref: taxon:4550 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: T7 primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown in the greenhouse. Anthers were harvested and pooled from early meiosis to late meiosis. The tissue, total RNA, and poly(A) RNA were prepared (Butler, Ross and Gustafson) at University of Missouri, Columbia. A cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA
ttttttttttttttttttaggtctagctttgcttattcattcaccacgtc
ccaagaggctcatcgccgattattactccaaacaataaatacaacaggtg
ctaggtaccagtagatacaggtagctttgcattgccgagcagaataaaat
tacagatggagggcgtggatgtccatatgatcccaaaccacattatgttc
cttgattgatccgtcgaggagcatgaacacagaagtagaaccacagtgta
atgccaaacaagtctctaagaagaaacaaaccctttcaaacagaatacaa
tgatgggccgtatgctccttgcttgcaaccgctttgttctagtcggcgcg
ggactggccggcacgcgaggagaggatgatgccgacgatgaggccgtaca
gggcaagcgcttcggcaaagatgaggatgaggatcattccgacgaacagc
ttgggctgctgtgcattg
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: BQ160601
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||