GrainGenes Sequence Report: BQ160736
Sequence
BQ160736
Contig
Ta.9420.1.S1_at NSFT03P2_Contig10612
External Databases
Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index
TC316776
wEST map position
BQ160736
NCBI UniGene
Ta.43058
DB Remark
Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, moderately similar to NP_001042903.1 Os01g0326000 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Chinese Spring
Chromosome
7DS
Clone Library
Wheat unstressed seedling shoot cDNA library
Tissue
Etiolated shoot
Developmental Stage
Five day old seedling
Data Source
genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title
WHE0325_E12_I23ZT Wheat unstressed seedling shoot cDNA library Triticum aestivum cDNA clone WHE0325_E12_I23, mRNA sequence.
Strain
lab_host E. coli SOLR
Clone
WHE0325_E12_I23
Probe
WHE0325_E12_I23
Remark
DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: T7 primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Seeds were surface-sterilized , germinated and grown aseptically in the dark at room temperature on filter paper with water, nystatin and cefotaxime in covered crystallization dishes. Shoots were harvested. The tissue, total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors). Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Seeds were surface-sterilized, germinated and grown aseptically in the dark at room temperature on filter paper with water, nystatin and cefotaxime in covered crystallization dishes. Shoots were harvested. The tissue, total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA
ttttttttttttttttttaacgaaggcgtagagttccattccgattggcg
acaaaacaaactcggcacatgcggcaactcggacgtaaaataaaataaaa
gtgcacacatgcacggtgcagacatgggcgacgatgattctaaaaaaaaa
agacatgggcgacggcgagtaaaacactgattattagcaaatccgatgaa
aaagagggcaaactgacgcggccggtgcaccaagtgtgtgcgtcagtctc
ggctacttcgtggcgatgcgtcattctcggctagctcgtggcagcgaggc
catcatcttcgactgagcccgccaggctgaccgacgacgacatcgggttg
acgacgttgcagttaagc
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: BQ160736
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||