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GrainGenes Sequence Report: Ta.20676.2.S1_a_at

Sequence
BQ166177
Contig
Ta.20676.1.S1_at
Ta.20676.2.S1_a_at
NSFT03P2_Contig13200
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC308383
wEST map position
BQ166177
NCBI UniGene
Ta.20676
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, strongly similar to NP_001136984.1 hypothetical protein LOC100217146 [Zea mays]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Chinese Spring
Chromosome
4AL
4BS
4DS
Clone Library
Wheat vernalized crown cDNA library
Tissue
Crown tissue of seedling
Developmental Stage
Five-week old seedling
Data Source
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0821-0824_F13_F13ZT Wheat vernalized crown cDNA library Triticum aestivum cDNA clone WHE0821-0824_F13_F13, mRNA sequence.
Strain
lab_host E. coli SOLR
Clone
WHE0821-0824_F13_F13
Probe
WHE0821-0824_F13_F13
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: T7 primer.
Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Seeds were germinated and grown at 4 C for 5 weeks. The tissue, total RNA, and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA
tttttttttttttttttcctcaaaaaattttatggatacatgcaaattag
gttcgccgattgtctaccaaaaaatatgaattgataattacacagataac
aattggcacctaactgggcagcaatttatgagataggtacaagaaaaaaa
atgaggtttgtttttcctatataacatcttcctagaaatcagataagccc
aatttgcagcatttactgtctaaaaatgaaaaaaaaggtataataataaa
tgatgccactgtatgtaagtacacttcatccggttttccagaactggttg
atattcccgagtaaccatcccttgactgaccacatgtttgacatcatccc
tcgtttctccttataaaaggtgaaattgtcatccaggaaggagcaaggat
aatactatcaacttgtaatttccataacctcattctatccaacagcaaag
atg

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