GrainGenes Sequence Report: BQ166412
Sequence
BQ166412
Contig
Ta.10723.1.A1_at NSFT03P2_Contig6232
External Databases
Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index
TC335550
wEST map position
BQ166412
NCBI UniGene
Ta.10723
DB Remark
Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, moderately similar to NP_001057118.1 Os06g0211200 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Chinese Spring
Chromosome
7AS 7BS
Clone Library
Wheat 20-45 DAP spike cDNA library
Tissue
Spike and seed
Developmental Stage
Adult plant
Data Source
genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title
WHE0854_C08_F16ZT Wheat 20-45 DAP spike cDNA library Triticum aestivum cDNA clone WHE0854_C08_F16, mRNA sequence.
Strain
lab_host E. coli SOLR
Clone
WHE0854_C08_F16
Probe
WHE0854_C08_F16
Remark
DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: T7 primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown in the greenhouse. Spikes at 20 DAP and seeds at 30 to 45 DAP were harvested, total RNA and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors ). Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown in the greenhouse. Spikes at 20 DAP and seeds at 30 to 45 DAP were harvested, total RNA and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA
gttttttttttttttttttagggattaaacagattagatactttgctttt
tgttcattttgaaagcagcaaagctagagacctaggacttaaattgtcac
ccaggaaccaactaaagaaaccgaacgaccgccgcaggagcagcaggaaa
gcggcggtctacgggggcagctggagactccggcttccgctgatatgtac
actggttgttcatctaaggaagccagacgtcccagctgctgtcaaggttg
tattgagcttcgggctaccatggacccgtcagtgttcgtcgcaagcaaaa
tctctttgcctttggtccaagctgcttttcgatcctctctataacctcat
ccttttgcttctgtagcatttccacctgttttttctgcaatgcctcattg
ttctccttcagttttgctacctcggcttccaactccattatataagcctg
cttcctctggcgggacctggcggcggactcccggttcttgatcatgcgcc
tctgccgcctctcgaccaccttctcgacggtaggccccttcctcgccctc
gtcacggtgtcgaagggat
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: BQ166412
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||