GrainGenes Sequence Report: BQ166941
Sequence
BQ166941
External Databases
Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index
TC319300
wEST map position
BQ166941
NCBI UniGene
Ta.4275
DB Remark
Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, moderately similar to NP_001062354.1 Os08g0535200 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Chinese Spring
Chromosome
5AL 5BL 5DL
Clone Library
Wheat 5-15 DAP spike cDNA library
Tissue
Spike
Developmental Stage
Adult plant
Data Source
genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title
WHE0943_F05_L09ZT Wheat 5-15 DAP spike cDNA library Triticum aestivum cDNA clone WHE0943_F05_L09, mRNA sequence.
Strain
lab_host E. coli SOLR
Clone
WHE0943_F05_L09
Probe
WHE0943_F05_L09
Remark
DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: T7 primer. Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown in the greenhouse. Spikes at 5, 10 and 15 DAP were harvested, total RNA and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors ). Note: Vector: Lambda Uni-ZAP XR, excised phagemid; Site_1: EcoRI; Site_2: XhoI; Plants were grown in the greenhouse. Spikes at 5, 10 and 15 DAP were harvested, total RNA and poly(A) RNA were prepared, a cDNA library was made, and the cDNA clones were in vivo excised to give pBluescript phagemids in the TJ Close lab (Choi, Close, Fenton) at the University of California, Riverside. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab (all other authors).
DNA
tttttttttttttttttttttttttttttgaacacgagcttctgtttata
actttatttcccagggcacgtggaatggtagatcagttaattgcccggcc
ggccggcatatcagacccttggacgacaacacacgaatgtgccactacta
cggaccattacaaacgaacgactgaaattaagaactatataaacgtatct
ctgctggcggtcggttcgcaaatcgttagcgattcatcgctaattaagca
tccatggtgagccaagcgcgtgaagcagcaggtagctccacgcacgtacg
tacgcatgggtcgtggatcggatcagaatgccttgatgtagcccttgcgc
ggggtgggcgagctgatctcctgctccatcttctgcagctccgccagcat
cggcagcgtgctcaccgtcagcatggccaccgc
GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: BQ166941
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GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture. | |||