Query (optional)   in Class  

GrainGenes Sequence Report: NSFT03P2_Contig17285

[Submit comment/correction]

Sequence
BQ167335
Contig
Ta.25124.2.S1_a_at
Ta.25124.2.S1_x_at
NSFT03P2_Contig17285
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC305718
wEST map position
BQ167335
NCBI UniGene
Ta.54351
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, strongly similar to NP_001055753.1 Os05g0459900 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
1AL
1BL
1DL
Clone Library
Cheyenne wheat endosperm cDNA library
Wheat endosperm cDNA library
Tissue
Cheyenne endosperm
Endosperm
Developmental Stage
5 -30 days post anthesis seed
5 to 30 days post anthesis seed
Data Source
genbankRelease 136, Jun 15 2003
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0062_H12_P22ZK Cheyenne wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0062_H12_P22, mRNA sequence.
Strain
lab_host E. coli SOLR
Clone
WHE0062_H12_P22
Probe
WHE0062_H12_P22
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: Stratagene's KS primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, Cheyenne endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA
cgattcggcacgagtttgaagcaaactcagaaataggagcaaacgatgca
ttgcaagttagatcaaaaatctcacaagacaggaggttcaacatagcata
atgtttagctggcggataacagtttcaagtctagttggttctagatgcag
taaaaactggacaccagaacagaagattgccatcaacttcatgagcttgg
gatgctctatttcttcttctcggttccagttccagcagatctcatcttcc
tgaggacactggacatctcctctctcttcttcttcgccctcttgtgggta
cccaactttcgcttcgccaccttcagggcacgcttgtccttgccaacctt
gagaagctcagtgatacgcttctcatacggagcaaacccagctacctccc
tgatcaagttcctgacgaaatgcaccctcttggtaccttccccttgcggt
cggacgggcgcggcggcagctcgcgcttggtgacgacgtggcccttgttg
atgcccacgaagaggcccgacttgggctgcgacggagct

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.