GrainGenes Sequence Report: BQ167630
Sequence
BQ167630
External Databases
Data at GenBank Data at EMBL Data at DDBJ
TIGR Gene Index
TC363832
wEST map position
BQ167630
NCBI UniGene
Ta.28967
DB Remark
Locus Source: Triticum aestivum (bread wheat) UniGene title 'Transcribed locus, weakly similar to NP_001055133.1 Os05g0300700 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
7AS 7BS 7DS
Clone Library
Cheyenne wheat endosperm cDNA library Wheat endosperm cDNA library
Tissue
Cheyenne endosperm Endosperm
Developmental Stage
5 -30 days post anthesis seed 5 to 30 days post anthesis seed
Data Source
genbank Release 136, Jun 15 2003 genbank Release 135, Apr 15 2003 genbank Updated Nov 2006
Title
WHE0079_E05_I09ZK Cheyenne wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0079_E05_I09, mRNA sequence.
Strain
lab_host E. coli SOLR
Clone
WHE0079_E05_I09
Probe
WHE0079_E05_I09
Remark
DB_xref: taxon:4565 Feature: source: mol_type = 'mRNA'; Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: Stratagene's KS primer. Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, Cheyenne endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab. Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA
cgattcggacgaggcaactgcagcttctccagaaagaagaaaggggagac
gcctacatgactactggcccatgctgccaaggcgtcagggcactcgtccg
tccatgatttgctgataaagggctccgacatggtggttgctgcacagacg
ctgtcctcgctccctaagaagatcaagaaggaacgcaaggagggcagctt
aaagagggcgctagggatagatgatgctaacggtggattgttcgctgaag
gggatgagaatattaagactgatctcaatgcacttccttcagttcctatc
caaaagaagct

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.
GrainGenes Sequence Report: BQ167630
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