Query (optional)   in Class  

GrainGenes Sequence Report: NSFT03P2_Contig16695

[Submit comment/correction]

Sequence
BQ167710
Contig
Ta.30743.1.S1_at
NSFT03P2_Contig16695
External Databases
Data at GenBank
Data at EMBL
Data at DDBJ
TIGR Gene Index
TC290912
wEST map position
BQ167710
NCBI UniGene
Ta.54454
DB Remark
Locus Source: Triticum aestivum (bread wheat)
UniGene title 'Transcribed locus, strongly similar to NP_001054405.1 Os05g0104800 [Oryza sativa (japonica cultivar-group)]'
Keyword
EST
Species
Triticum aestivum
Cultivar
Cheyenne
Chromosome
6AS
6DS
Clone Library
Cheyenne wheat endosperm cDNA library
Wheat endosperm cDNA library
Tissue
Cheyenne endosperm
Endosperm
Developmental Stage
5 -30 days post anthesis seed
5 to 30 days post anthesis seed
Data Source
genbankRelease 136, Jun 15 2003
genbankRelease 135, Apr 15 2003
genbankUpdated Nov 2006
Title
WHE0086_H10_P20ZK Cheyenne wheat endosperm cDNA library Triticum aestivum cDNA clone WHE0086_H10_P20, mRNA sequence.
Strain
lab_host E. coli SOLR
Clone
WHE0086_H10_P20
Probe
WHE0086_H10_P20
Remark
DB_xref: taxon:4565
Feature: source: mol_type = 'mRNA';
Locus Comment: Contact: Olin Anderson; US Department of Agriculture, Agriculture Research Service, Pacific; West Area, Western Regional Research Center; 800 Buchanan Street, Albany, CA 94710, USA; Tel: 5105595773; Fax: 5105595818; Email: oandersn@pw.usda.gov; This EST was generated by sequencing from the 3' end of the clone.; Sequences have been trimmed to remove vector sequence and low; quality sequence with phred score less than 20.; Seq primer: Stratagene's KS primer.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, Cheyenne endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
Note: Vector: Lambda ZAP II, excised phagemid; Site_1: EcoRI; Seeds collected, endosperm isolated, and RNA prepared by Susan Altenbach. Library constructed by Stratagene, Inc. Plasmid DNA preparations and DNA sequencing were performed in the OD Anderson lab.
DNA
tcggacgagccgccgcgcgccgtcgctcctcccccctcgcctcgctgccc
tcaccgagctccatggcggcgccggagacctccacctgcggcgcgggccc
cgcgctcctcttcccgtcgtcctcgtcctcctcgtcgtccgcgcgggtgg
aggccgtcgtcgtattcaccatctgcgacagcttcgtgcgccggcccgac
caggcggagcgcgtcatcggcaccctcctcggctccgtcctccccgacgg
caccgtccacgtccgcaacgcctacgtcgtcccccacagcgagtccgccg
accaggttgctctcgacattgagtaccaccacaacatgtacgcgtcgcac
cagaaggtgaaccccaaggaagtgcttgtgggatggttctccactggctt
tggtgtttc

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.